RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 MYO1EQ12965 1108 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 CUL2Q13617 745 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 RAPGEF1Q13905 1077 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 DRAP1Q14919 205 aaPredicted RBP8.66□□□□□ -1.02
TARDBP-219ENST00000617757 UPP1Q16831 310 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 WDR72Q3MJ13 1102 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 ZNF667Q5HYK9 610 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 TMEM240Q5SV17 173 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 PSRC1Q6PGN9 363 aaPredicted RBP8.66□□□□□ -1.02
TARDBP-219ENST00000617757 WDR59Q6PJI9 974 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 ENOSF1Q7L5Y1 443 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 ZNF280BQ86YH2 543 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 LRRC8AQ8IWT6 810 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 COLGALT2Q8IYK4 626 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 ABI1Q8IZP0 508 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 RSPH1Q8WYR4 309 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 FAXDC2Q96IV6 333 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 UROC1Q96N76 676 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 SPAG5Q96R06 1193 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 DNAJC7Q99615 494 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.66□□□□□ -1.023e-6■□□□□ 10.1
TARDBP-219ENST00000617757 PAAF1Q9BRP4 392 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 NIF3L1Q9GZT8 377 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 NUCKS1Q9H1E3 243 aaKnown RBP8.66□□□□□ -1.02
TARDBP-219ENST00000617757 RC3H2Q9HBD1 1191 aaKnown RBP8.66□□□□□ -1.02
TARDBP-219ENST00000617757 CACNG4Q9UBN1 327 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 NXF1Q9UBU9 619 aaKnown RBP8.66□□□□□ -1.02
TARDBP-219ENST00000617757 POLIQ9UNA4 740 aa8.66□□□□□ -1.02
TARDBP-219ENST00000617757 CASTOR2A6NHX0 329 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 C19orf67A6NJJ6 358 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 TBKBP1A7MCY6 615 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 ZBBXA8MT70 800 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 F8VZ95 297 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 FOXN3O00409 490 aaPredicted RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 PODXLO00592 558 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 SPTLC1O15269 473 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 B4GALT3O60512 393 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 PNMA6AP0CW24 399 aaPredicted RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 ACO1P21399 889 aaKnown RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 TBXAS1P24557 533 aaPredicted RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 IGFBP6P24592 240 aaPredicted RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 HNRNPH3P31942 346 aaKnown RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 PNPLA4P41247 253 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 STAT1P42224 750 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 ASPAP45381 313 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 KCNJ6P48051 423 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 TAF6P49848 677 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 LILRA4P59901 499 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 RNASELQ05823 741 aaKnown RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 SV2CQ496J9 727 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 SFMBT2Q5VUG0 894 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 E4F1Q66K89 784 aaPredicted RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 CD300LGQ6UXG3 332 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 IRF2BP2Q7Z5L9 587 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 TMCO2Q7Z6W1 182 aaPredicted RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 TMEM139Q8IV31 216 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 UBR7Q8N806 425 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 C3orf58Q8NDZ4 430 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 HERVK_113Q902F9 699 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 SHC3Q92529 594 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 RABGGTAQ92696 567 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 SYN2Q92777 582 aaPredicted RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 JAKMIP2Q96AA8 810 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 ZNF689Q96CS4 500 aaPredicted RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 DDX27Q96GQ7 796 aaKnown RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 FAM193BQ96PV7 902 aaPredicted RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 PANX2Q96RD6 677 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 ARID3AQ99856 593 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 LBHD1Q9BQE6 289 aaPredicted RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 MRPL9Q9BYD2 267 aaKnown RBP8.65□□□□□ -1.02
TARDBP-219ENST00000617757 BCO2Q9BYV7 579 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 NRDE2Q9H7Z3 1164 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 AIPL1Q9NZN9 384 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 DNAJB4Q9UDY4 337 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 PLXNA4Q9HCM2 1894 aa8.65□□□□□ -1.02
TARDBP-219ENST00000617757 KPNA7A9QM74 516 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 GFPT2O94808 682 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 SKILP12757 684 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 P4HA1P13674 534 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 FERP16591 822 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 FECHP22830 423 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 CLCN1P35523 988 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 SOX5P35711 763 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 RAP1GAPP47736 663 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 CDH8P55286 799 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 TNNC1P63316 161 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 CCZ1BP86790 482 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 CCZ1P86791 482 aaPredicted RBP8.64□□□□□ -1.03
TARDBP-219ENST00000617757 ASIC2Q16515 512 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 MEA1Q16626 185 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 TSR1Q2NL82 804 aaKnown RBP8.64□□□□□ -1.03
TARDBP-219ENST00000617757 PAN2Q504Q3 1202 aaKnown RBP8.64□□□□□ -1.03
TARDBP-219ENST00000617757 SMYD5Q6GMV2 418 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 FAM117BQ6P1L5 589 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 DCLRE1AQ6PJP8 1040 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 SCARA5Q6ZMJ2 495 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 LIMS2Q7Z4I7 341 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 FAM71AQ8IYT1 594 aa8.64□□□□□ -1.03
TARDBP-219ENST00000617757 ZNF830Q96NB3 372 aaPredicted RBP8.64□□□□□ -1.03
TARDBP-219ENST00000617757 CHP1Q99653 195 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms