RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 SLC9A2Q9UBY0 812 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 TRPC5Q9UL62 973 aaPredicted RBP13.26□□□□□ -0.29
MSH6-213ENST00000614496 HEY1Q9Y5J3 304 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 ATXN2Q99700 1313 aaKnown RBP13.26□□□□□ -0.29
MSH6-213ENST00000614496 KRT16P08779 473 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 WEE2P0C1S8 567 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 XRCC4Q13426 336 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 PKN2Q16513 984 aaKnown RBP13.25□□□□□ -0.29
MSH6-213ENST00000614496 CRY2Q49AN0 593 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 CFAP157Q5JU67 520 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 UBAP2Q5T6F2 1119 aaKnown RBP13.25□□□□□ -0.29
MSH6-213ENST00000614496 C3orf62Q6ZUJ4 267 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 SH3BP5LQ7L8J4 393 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 FAM71AQ8IYT1 594 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 KCTD17Q8N5Z5 321 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 MAGEB18Q96M61 343 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 RXFP1Q9HBX9 757 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 SLCO1B3Q9NPD5 702 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 CHMP2BQ9UQN3 213 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 ATP5HO75947 161 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 BRD2P25440 801 aaKnown RBP13.25□□□□□ -0.29
MSH6-213ENST00000614496 C6orf89Q6UWU4 347 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 HIPK4Q8NE63 616 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 KIF9Q9HAQ2 790 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 AFF2P51816 1311 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 CACNA1SQ13698 1873 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 IGLV3-22A0A075B6J6 115 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 LPXNO60711 386 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 PROSCO94903 275 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 GTF2H1P32780 548 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 TMPRSS15P98073 1019 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 FEZF2Q8TBJ5 459 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 CERKQ8TCT0 537 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 PAGR1Q9BTK6 254 aa13.25□□□□□ -0.29
MSH6-213ENST00000614496 MARCOQ9UEW3 520 aaPredicted RBP13.25□□□□□ -0.29
MSH6-213ENST00000614496 CBX6O95503 412 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 POLE2P56282 527 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 PSMC1P62191 440 aaKnown RBP13.24□□□□□ -0.29
MSH6-213ENST00000614496 CYP24A1Q07973 514 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 NCOA4Q13772 614 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 CDR2LQ86X02 465 aaPredicted RBP13.24□□□□□ -0.29
MSH6-213ENST00000614496 ATP11CQ8NB49 1132 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 FAF2Q96CS3 445 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 NLRP4Q96MN2 994 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 MTFR1LQ9H019 292 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 NGRNQ9NPE2 291 aaKnown RBP13.24□□□□□ -0.29
MSH6-213ENST00000614496 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.24□□□□□ -0.293e-10■■■■■ 28.1
MSH6-213ENST00000614496 C15orf41Q9Y2V0 281 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 TOM1L1O75674 476 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 MAP3K6O95382 1288 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 NR3C2P08235 984 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 NCALDP61601 193 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 CENPCQ03188 943 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 TTLL12Q14166 644 aaPredicted RBP13.24□□□□□ -0.29
MSH6-213ENST00000614496 DACT2Q5SW24 774 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 OR6B2Q6IFH4 312 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 ZBTB8OSQ8IWT0 167 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 CKAP2Q8WWK9 683 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 SPATS2LQ9NUQ6 558 aaKnown RBP13.24□□□□□ -0.29
MSH6-213ENST00000614496 DNPEPQ9ULA0 475 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 MAGED2Q9UNF1 606 aaPredicted RBP13.24□□□□□ -0.29
MSH6-213ENST00000614496 RGL2O15211 777 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 CST8O60676 142 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 PECAM1P16284 738 aaPredicted RBP13.24□□□□□ -0.29
MSH6-213ENST00000614496 ORC1Q13415 861 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 MTMR2Q13614 643 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 RCOR2Q8IZ40 523 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 FBXO41Q8TF61 875 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 ATXN2LQ8WWM7 1075 aaKnown RBP13.24□□□□□ -0.29
MSH6-213ENST00000614496 SHC3Q92529 594 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 GBP5Q96PP8 586 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 IDI2Q9BXS1 227 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 RPAP3Q9H6T3 665 aaPredicted RBP13.24□□□□□ -0.29
MSH6-213ENST00000614496 AGO4Q9HCK5 861 aaKnown RBP13.24□□□□□ -0.29
MSH6-213ENST00000614496 COPEO14579 308 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 CALB1P05937 261 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 PRKCEQ02156 737 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 SPDYCQ5MJ68 293 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 CHADLQ6NUI6 762 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 FAM151AQ8WW52 585 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 SPOCK2Q92563 424 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 FAM161BQ96MY7 647 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 MYLK2Q9H1R3 596 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 KIAA1586Q9HCI6 787 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 PSMC3IPQ9P2W1 217 aaPredicted RBP13.24□□□□□ -0.29
MSH6-213ENST00000614496 SAE1Q9UBE0 346 aaPredicted RBP13.24□□□□□ -0.29
MSH6-213ENST00000614496 KCNG1Q9UIX4 513 aa13.24□□□□□ -0.29
MSH6-213ENST00000614496 SYNJ2BP-COX16A0A087WUM0 186 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 BANF1O75531 89 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 PPP6R3Q5H9R7 873 aaPredicted RBP13.23□□□□□ -0.29
MSH6-213ENST00000614496 C1orf228Q6PIY5 440 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 CDAN1Q8IWY9 1227 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 COX16Q9P0S2 106 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 AGAP1Q9UPQ3 857 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 SMG5Q9UPR3 1016 aaKnown RBP13.23□□□□□ -0.29
MSH6-213ENST00000614496 IQANK1A0A1B0GTG1 560 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 KIF1CO43896 1103 aaKnown RBP13.23□□□□□ -0.29
MSH6-213ENST00000614496 DGAT1O75907 488 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 SSTR1P30872 391 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 DGKZQ13574 1117 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms