RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 ATF7IP2Q5U623 682 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 WDR78Q5VTH9 848 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 FOXR1Q6PIV2 292 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 MMS22LQ6ZRQ5 1243 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 RHOT1Q8IXI2 618 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 GTF3C2Q8WUA4 911 aaPredicted RBP12.68□□□□□ -0.38
SRRT-213ENST00000611405 ZNF606Q8WXB4 792 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 PABPC3Q9H361 631 aaKnown RBP12.68□□□□□ -0.38
SRRT-213ENST00000611405 CENPHQ9H3R5 247 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 LCMT1Q9UIC8 334 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 NUDT17P0C025 328 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 IFFO1Q0D2I5 559 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 C9orf131Q5VYM1 1079 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 FEZF2Q8TBJ5 459 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 COPS5Q92905 334 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 FHDC1Q9C0D6 1143 aaPredicted RBP12.68□□□□□ -0.38
SRRT-213ENST00000611405 HOMER3Q9NSC5 361 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 B4GALT4O60513 344 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 TNNC2P02585 160 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 PDCLQ13371 301 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 SLMAPQ14BN4 828 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 PPP1R7Q15435 360 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 C2CD6Q53TS8 623 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 EFCAB12Q6NXP0 572 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 LLGL2Q6P1M3 1020 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 KATNAL2Q8IYT4 538 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 ART4Q93070 314 aa12.68□□□□□ -0.38
SRRT-213ENST00000611405 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
SRRT-213ENST00000611405 FEZ2Q9UHY8 353 aaPredicted RBP12.68□□□□□ -0.38
SRRT-213ENST00000611405 INO80B-WBP1J3KQ70 363 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 CALB1P05937 261 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 HOXC6P09630 235 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 TMEM191BP0C7N4 346 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 MMP8P22894 467 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 KCNJ1P48048 391 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 YWHAEP62258 255 aaKnown RBP12.67□□□□□ -0.38
SRRT-213ENST00000611405 SNAPC2Q13487 334 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 ZNF568Q3ZCX4 644 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 ZNF484Q5JVG2 852 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 DENND2CQ68D51 928 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 HOOK3Q86VS8 718 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 GRK7Q8WTQ7 553 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 ANKRD36BP1Q96IX9 119 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 NLRP4Q96MN2 994 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 NFKBIZQ9BYH8 718 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 INO80BQ9C086 356 aaPredicted RBP12.67□□□□□ -0.38
SRRT-213ENST00000611405 ZNF518BQ9C0D4 1074 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 CISHQ9NSE2 258 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 ERAP1Q9NZ08 941 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 WHRNQ9P202 907 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 IP6K2Q9UHH9 426 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 RSPH14Q9UHP6 348 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 PNMA3Q9UL41 463 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 TNFSF13BQ9Y275 285 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 PTPN22Q9Y2R2 807 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 SRRM3A6NNA2 597 aaPredicted RBP12.67□□□□□ -0.38
SRRT-213ENST00000611405 TLR3O15455 904 aaKnown RBP12.67□□□□□ -0.38
SRRT-213ENST00000611405 IL18RAPO95256 599 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 EPHX2P34913 555 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 MDH1P40925 334 aaKnown RBP12.67□□□□□ -0.38
SRRT-213ENST00000611405 TFAMQ00059 246 aaKnown RBP12.67□□□□□ -0.38
SRRT-213ENST00000611405 POU5F1BQ06416 359 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 KRT71Q3SY84 523 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 TTC19Q6DKK2 380 aaPredicted RBP12.67□□□□□ -0.38
SRRT-213ENST00000611405 CROCCP2Q86T23 111 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 BCAS4Q8TDM0 211 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 TRAPPC12Q8WVT3 735 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 C1orf54Q8WWF1 131 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 EPB41L4BQ9H329 900 aa12.67□□□□□ -0.38
SRRT-213ENST00000611405 ZEB2O60315 1214 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 SSTR3P32745 418 aaPredicted RBP12.66□□□□□ -0.38
SRRT-213ENST00000611405 MBTD1Q05BQ5 628 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 CALCOCO2Q13137 446 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 LAMC2Q13753 1193 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 ZNF699Q32M78 642 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 SCARA3Q6AZY7 606 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 TMEM35BQ8NCS4 154 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 EXD1Q8NHP7 514 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 DCLK3Q9C098 648 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 PDGFCQ9NRA1 345 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 CD58P19256 250 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 CETN2P41208 172 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 LDLRAD1Q5T700 205 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 THNSL1Q8IYQ7 743 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 RPF1Q9H9Y2 349 aaKnown RBP12.66□□□□□ -0.38
SRRT-213ENST00000611405 PRMT7Q9NVM4 692 aaPredicted RBP12.66□□□□□ -0.38
SRRT-213ENST00000611405 PCDHGC3Q9UN70 934 aa12.66□□□□□ -0.38
SRRT-213ENST00000611405 C22orf31O95567 290 aa12.65□□□□□ -0.38
SRRT-213ENST00000611405 RARGP13631 454 aa12.65□□□□□ -0.38
SRRT-213ENST00000611405 ITIH2P19823 946 aa12.65□□□□□ -0.38
SRRT-213ENST00000611405 LSP1P33241 339 aa12.65□□□□□ -0.38
SRRT-213ENST00000611405 PHKA2P46019 1235 aa12.65□□□□□ -0.38
SRRT-213ENST00000611405 CLCN3P51790 818 aa12.65□□□□□ -0.38
SRRT-213ENST00000611405 TAS2R40P59535 323 aa12.65□□□□□ -0.38
SRRT-213ENST00000611405 TAP1Q03518 808 aa12.65□□□□□ -0.38
SRRT-213ENST00000611405 KRT17Q04695 432 aa12.65□□□□□ -0.38
SRRT-213ENST00000611405 PTK6Q13882 451 aa12.65□□□□□ -0.38
SRRT-213ENST00000611405 FAM187BQ17R55 369 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms