RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ACVR2BQ13705 512 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 PLCB4Q15147 1175 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 STILQ15468 1287 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 TTC31Q49AM3 519 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 DCAF6Q58WW2 860 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 PID1Q7Z2X4 250 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 FEZF2Q8TBJ5 459 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 RIN2Q8WYP3 895 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 MTMR8Q96EF0 704 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 RASSF4Q9H2L5 321 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 CISHQ9NSE2 258 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 IPO11Q9UI26 975 aaKnown RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 MANSC4A6NHS7 340 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 HMGB1P1B2RPK0 211 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 RASA4BC9J798 803 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 RASA4O43374 803 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 TFRCP02786 760 aaKnown RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 XPAP23025 273 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 PTGER2P43116 358 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 DLG4P78352 724 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 THOC5Q13769 683 aaKnown RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 DHX34Q14147 1143 aaKnown RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 MYBPC2Q14324 1141 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 UGCGQ16739 394 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 GOLGA7BQ2TAP0 167 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 LRRC55Q6ZSA7 311 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 TLK2Q86UE8 772 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 PPM1NQ8N819 430 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 PDCD6IPQ8WUM4 868 aaKnown RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 KAT5Q92993 513 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 THOC1Q96FV9 657 aaKnown RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 PFDN4Q9NQP4 134 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 METTL5Q9NRN9 209 aaKnown RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 GTPBP10A4D1E9 387 aaKnown RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 KLRG2A4D1S0 409 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 EPHB6O15197 1021 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 CST8O60676 142 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 MAP3K6O95382 1288 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 AKAP5P24588 427 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 SULT1E1P49888 294 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 ATN1P54259 1190 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 TBX2Q13207 712 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 PIGHQ14442 188 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 CCNI2Q6ZMN8 369 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-218ENST00000610726 ZNF677Q86XU0 584 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 ARHGEF19Q8IW93 802 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 USP38Q8NB14 1042 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 DEPDC1BQ8WUY9 529 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 EXOC4Q96A65 974 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 FAM84AQ96KN4 292 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 C9orf72Q96LT7 481 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 AGAP3Q96P47 875 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 VTA1Q9NP79 307 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 ACP6Q9NPH0 428 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 SLC38A7Q9NVC3 462 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 SNTG2Q9NY99 539 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 BAIAP2L1Q9UHR4 511 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 LCMT1Q9UIC8 334 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 TLK1Q9UKI8 766 aa7.68□□□□□ -1.18
CSDE1-218ENST00000610726 RGPD5Q99666 1765 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 IGKV6D-41A0A0C4DH26 115 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 TRPA1O75762 1119 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 LGALS2P05162 132 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 HMBSP08397 361 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 PPP3CAQ08209 521 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 SV2CQ496J9 727 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 CCDC38Q502W7 563 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 ARSHQ5FYA8 562 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 KCNT1Q5JUK3 1230 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 NUGGCQ68CJ6 796 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 MAP4K3Q8IVH8 894 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 RCOR2Q8IZ40 523 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 HASPINQ8TF76 798 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 SNF8Q96H20 258 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 FGFBP2Q9BYJ0 223 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 CAPN7Q9Y6W3 813 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 COL1A1P02452 1464 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-218ENST00000610726 TARSL2A2RTX5 802 aaKnown RBP7.67□□□□□ -1.18
CSDE1-218ENST00000610726 CIB2O75838 187 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 SUN1O94901 812 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 MAPTP10636 758 aaKnown RBP7.67□□□□□ -1.18
CSDE1-218ENST00000610726 RALAP11233 206 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 PCSK1P29120 753 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 CDH8P55286 799 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 RPS6KA2Q15349 733 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 DCAF4L1Q3SXM0 396 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 KDELC2Q7Z4H8 507 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 ASAP3Q8TDY4 903 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 TINF2Q9BSI4 451 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 L2HGDHQ9H9P8 463 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 H3BRJ5 948 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 ACKR2O00590 384 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 APOL1O14791 398 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 KCNN4O15554 427 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 USP2O75604 605 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-218ENST00000610726 APRTP07741 180 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 GJB1P08034 283 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 ACO1P21399 889 aaKnown RBP7.67□□□□□ -1.18
CSDE1-218ENST00000610726 ANO5Q75V66 913 aa7.67□□□□□ -1.18
CSDE1-218ENST00000610726 JAMLQ86YT9 394 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms