RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CCP110O43303 1012 aa24.2■■□□□ 1.46
IRF3-228ENST00000601291 AKR1B10O60218 316 aa24.2■■□□□ 1.46
IRF3-228ENST00000601291 SCARA5Q6ZMJ2 495 aa24.2■■□□□ 1.46
IRF3-228ENST00000601291 TOGARAM2Q6ZUX3 1019 aa24.2■■□□□ 1.46
IRF3-228ENST00000601291 URGCPQ8TCY9 931 aa24.2■■□□□ 1.46
IRF3-228ENST00000601291 LRFN2Q9ULH4 789 aa24.2■■□□□ 1.46
IRF3-228ENST00000601291 PCDHB7Q9Y5E2 793 aa24.2■■□□□ 1.46
IRF3-228ENST00000601291 PCDHB4Q9Y5E5 795 aa24.2■■□□□ 1.46
IRF3-228ENST00000601291 TRIM43BA6NCK2 446 aa24.19■■□□□ 1.46
IRF3-228ENST00000601291 CCDC175P0C221 793 aa24.19■■□□□ 1.46
IRF3-228ENST00000601291 KIF11P52732 1056 aa24.19■■□□□ 1.46
IRF3-228ENST00000601291 PTK2Q05397 1052 aa24.19■■□□□ 1.46
IRF3-228ENST00000601291 TMEM199Q8N511 208 aa24.19■■□□□ 1.46
IRF3-228ENST00000601291 TRIM43Q96BQ3 446 aaPredicted RBP24.19■■□□□ 1.46
IRF3-228ENST00000601291 BCO2Q9BYV7 579 aa24.19■■□□□ 1.46
IRF3-228ENST00000601291 CYP3A43Q9HB55 503 aa24.19■■□□□ 1.46
IRF3-228ENST00000601291 GOLGA2P5Q9HBQ8 144 aa24.19■■□□□ 1.46
IRF3-228ENST00000601291 MIOSQ9NXC5 875 aa24.19■■□□□ 1.46
IRF3-228ENST00000601291 POLIQ9UNA4 740 aa24.19■■□□□ 1.46
IRF3-228ENST00000601291 TRIP11Q15643 1979 aa24.19■■□□□ 1.46
IRF3-228ENST00000601291 KIAA0100Q14667 2235 aaKnown RBP24.18■■□□□ 1.46
IRF3-228ENST00000601291 EIF3CLB5ME19 914 aaKnown RBP24.18■■□□□ 1.46
IRF3-228ENST00000601291 CYP26A1O43174 497 aa24.18■■□□□ 1.46
IRF3-228ENST00000601291 ZSCAN12O43309 604 aa24.18■■□□□ 1.46
IRF3-228ENST00000601291 ACO1P21399 889 aaKnown RBP24.18■■□□□ 1.46
IRF3-228ENST00000601291 TAF6P49848 677 aa24.18■■□□□ 1.46
IRF3-228ENST00000601291 PDE6CP51160 858 aa24.18■■□□□ 1.46
IRF3-228ENST00000601291 BPIFB4P59827 614 aa24.18■■□□□ 1.46
IRF3-228ENST00000601291 IKBKEQ14164 716 aa24.18■■□□□ 1.46
IRF3-228ENST00000601291 NAB2Q15742 525 aa24.18■■□□□ 1.46
IRF3-228ENST00000601291 SV2CQ496J9 727 aa24.18■■□□□ 1.46
IRF3-228ENST00000601291 EIF3CQ99613 913 aaKnown RBP24.18■■□□□ 1.46
IRF3-228ENST00000601291 FAM124BQ9H5Z6 455 aaPredicted RBP24.18■■□□□ 1.46
IRF3-228ENST00000601291 SCN5AQ14524 2016 aa24.18■■□□□ 1.46
IRF3-228ENST00000601291 PPEF2O14830 753 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 HOXA2O43364 376 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 POMCP01189 267 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 CD58P19256 250 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 AFF1P51825 1210 aaKnown RBP24.17■■□□□ 1.46
IRF3-228ENST00000601291 KRT83P78385 493 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 SPA17Q15506 151 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 TCTN1Q2MV58 587 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 TMEM270Q6UE05 265 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 TTC39CQ8N584 583 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 UBR7Q8N806 425 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 DESI2Q9BSY9 194 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.17■■□□□ 1.46
IRF3-228ENST00000601291 CISHQ9NSE2 258 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 KANSL3Q9P2N6 904 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 PRKAG2Q9UGJ0 569 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 CNTN6Q9UQ52 1028 aa24.17■■□□□ 1.46
IRF3-228ENST00000601291 RPL9P32969 192 aaKnown RBP24.16■■□□□ 1.46
IRF3-228ENST00000601291 CLCN1P35523 988 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 ASTE1Q2TB18 679 aaPredicted RBP24.16■■□□□ 1.46
IRF3-228ENST00000601291 MFSD5Q6N075 450 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 ZNF571Q7Z3V5 609 aaPredicted RBP24.16■■□□□ 1.46
IRF3-228ENST00000601291 ABI1Q8IZP0 508 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 RBBP8NLQ8NC74 664 aaPredicted RBP24.16■■□□□ 1.46
IRF3-228ENST00000601291 UROC1Q96N76 676 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 MMS19Q96T76 1030 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 KCND1Q9NSA2 647 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 PPP2R2CQ9Y2T4 447 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 ADGRG1Q9Y653 693 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 PFKMP08237 780 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 WEE2P0C1S8 567 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 FGFR1P11362 822 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 TUSC3Q13454 348 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 BMS1Q14692 1282 aaKnown RBP24.16■■□□□ 1.46
IRF3-228ENST00000601291 NOMO2Q5JPE7 1267 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 CLLU1OSQ5K130 101 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 RPUSD2Q8IZ73 545 aaKnown RBP24.16■■□□□ 1.46
IRF3-228ENST00000601291 CCAR2Q8N163 923 aaKnown RBP24.16■■□□□ 1.46
IRF3-228ENST00000601291 RSPH1Q8WYR4 309 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 DDX27Q96GQ7 796 aaKnown RBP24.16■■□□□ 1.46
IRF3-228ENST00000601291 SMYD3Q9H7B4 428 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 SPTLC3Q9NUV7 552 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 SNX9Q9Y5X1 595 aa24.16■■□□□ 1.46
IRF3-228ENST00000601291 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.15■■□□□ 1.46
IRF3-228ENST00000601291 KPNA7A9QM74 516 aa24.15■■□□□ 1.46
IRF3-228ENST00000601291 PODXLO00592 558 aa24.15■■□□□ 1.46
IRF3-228ENST00000601291 CYP11B1P15538 503 aa24.15■■□□□ 1.46
IRF3-228ENST00000601291 SLC18A3Q16572 532 aa24.15■■□□□ 1.46
IRF3-228ENST00000601291 SLC47A2Q86VL8 602 aa24.15■■□□□ 1.46
IRF3-228ENST00000601291 NPAS4Q8IUM7 802 aa24.15■■□□□ 1.46
IRF3-228ENST00000601291 ACRBPQ8NEB7 543 aa24.15■■□□□ 1.46
IRF3-228ENST00000601291 EPS8L1Q8TE68 723 aa24.15■■□□□ 1.46
IRF3-228ENST00000601291 ADAMTS1Q9UHI8 967 aa24.15■■□□□ 1.46
IRF3-228ENST00000601291 CASTOR2A6NHX0 329 aa24.14■■□□□ 1.45
IRF3-228ENST00000601291 LCA5LO95447 670 aa24.14■■□□□ 1.45
IRF3-228ENST00000601291 CSF2RAP15509 400 aa24.14■■□□□ 1.45
IRF3-228ENST00000601291 ITGB8P26012 769 aa24.14■■□□□ 1.45
IRF3-228ENST00000601291 RAP1GAPP47736 663 aa24.14■■□□□ 1.45
IRF3-228ENST00000601291 GFPT1Q06210 699 aaPredicted RBP24.14■■□□□ 1.45
IRF3-228ENST00000601291 C17orf53Q8N3J3 647 aaPredicted RBP24.14■■□□□ 1.45
IRF3-228ENST00000601291 AGPAT1Q99943 283 aa24.14■■□□□ 1.45
IRF3-228ENST00000601291 LUC7LQ9NQ29 371 aaKnown RBP24.14■■□□□ 1.45
IRF3-228ENST00000601291 GDAP2Q9NXN4 497 aa24.14■■□□□ 1.45
IRF3-228ENST00000601291 ABHD14A-ACY1A0A1B0GW23 586 aa24.13■■□□□ 1.45
IRF3-228ENST00000601291 TNFAIP3P21580 790 aa24.13■■□□□ 1.45
IRF3-228ENST00000601291 CLCNKBP51801 687 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms