RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 PLEKHO2Q8TD55 490 aa17.04■□□□□ 0.32
RPS28-203ENST00000600659 HDAC7Q8WUI4 952 aa17.04■□□□□ 0.32
RPS28-203ENST00000600659 ERCC4Q92889 916 aaPredicted RBP17.04■□□□□ 0.32
RPS28-203ENST00000600659 TIGD1Q96MW7 591 aa17.04■□□□□ 0.32
RPS28-203ENST00000600659 PHF7Q9BWX1 381 aaPredicted RBP17.04■□□□□ 0.32
RPS28-203ENST00000600659 RHOBTB2Q9BYZ6 727 aa17.04■□□□□ 0.32
RPS28-203ENST00000600659 TIMM13Q9Y5L4 95 aaPredicted RBP17.04■□□□□ 0.32
RPS28-203ENST00000600659 MYO10Q9HD67 2058 aa17.04■□□□□ 0.32
RPS28-203ENST00000600659 ZNF233A6NK53 670 aa17.03■□□□□ 0.32
RPS28-203ENST00000600659 CYP24A1Q07973 514 aa17.03■□□□□ 0.32
RPS28-203ENST00000600659 SNRNP35Q16560 246 aaKnown RBP17.03■□□□□ 0.32
RPS28-203ENST00000600659 HS2ST1Q7LGA3 356 aa17.03■□□□□ 0.32
RPS28-203ENST00000600659 SLC9A9Q8IVB4 645 aa17.03■□□□□ 0.32
RPS28-203ENST00000600659 GJD3Q8N144 294 aa17.03■□□□□ 0.32
RPS28-203ENST00000600659 XXYLT1Q8NBI6 393 aa17.03■□□□□ 0.32
RPS28-203ENST00000600659 KREMEN2Q8NCW0 462 aa17.03■□□□□ 0.32
RPS28-203ENST00000600659 MTMR12Q9C0I1 747 aa17.03■□□□□ 0.32
RPS28-203ENST00000600659 PLEKHA4Q9H4M7 779 aa17.03■□□□□ 0.32
RPS28-203ENST00000600659 INTS13Q9NVM9 706 aa17.03■□□□□ 0.32
RPS28-203ENST00000600659 CGNQ9P2M7 1197 aaKnown RBP17.03■□□□□ 0.32
RPS28-203ENST00000600659 FBXL5Q9UKA1 691 aa17.03■□□□□ 0.32
RPS28-203ENST00000600659 GOLGA6L4A6NEF3 574 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 PDXKO00764 312 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 ZMYND10O75800 440 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 ABLIM3O94929 683 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 OAZ2O95190 189 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 VNN2O95498 520 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 ITGB3P05106 788 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 TYMPP19971 482 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 TFAMQ00059 246 aaKnown RBP17.02■□□□□ 0.32
RPS28-203ENST00000600659 PSMD6Q15008 389 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 ZCWPW2Q504Y3 356 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 C15orf39Q6ZRI6 1047 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 SMYD4Q8IYR2 804 aaPredicted RBP17.02■□□□□ 0.32
RPS28-203ENST00000600659 NOC3LQ8WTT2 800 aaKnown RBP17.02■□□□□ 0.32
RPS28-203ENST00000600659 SENP8Q96LD8 212 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 KIAA1586Q9HCI6 787 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 TRAF3IP3Q9Y228 551 aa17.02■□□□□ 0.32
RPS28-203ENST00000600659 CCDC195A0A1B0GUA6 201 aa17.01■□□□□ 0.31
RPS28-203ENST00000600659 CYP11A1P05108 521 aa17.01■□□□□ 0.31
RPS28-203ENST00000600659 POLR2BP30876 1174 aaKnown RBP17.01■□□□□ 0.31
RPS28-203ENST00000600659 CASP4P49662 377 aa17.01■□□□□ 0.31
RPS28-203ENST00000600659 TAF6P49848 677 aa17.01■□□□□ 0.31
RPS28-203ENST00000600659 ZNF280DQ6N043 979 aa17.01■□□□□ 0.31
RPS28-203ENST00000600659 CES5AQ6NT32 575 aa17.01■□□□□ 0.31
RPS28-203ENST00000600659 ELOA2Q8IYF1 753 aaPredicted RBP17.01■□□□□ 0.31
RPS28-203ENST00000600659 GUF1Q8N442 669 aaKnown RBP17.01■□□□□ 0.31
RPS28-203ENST00000600659 RDH13Q8NBN7 331 aa17.01■□□□□ 0.31
RPS28-203ENST00000600659 APPL2Q8NEU8 664 aa17.01■□□□□ 0.31
RPS28-203ENST00000600659 MFSD14AQ96MC6 490 aa17.01■□□□□ 0.31
RPS28-203ENST00000600659 RTP3Q9BQQ7 232 aa17.01■□□□□ 0.31
RPS28-203ENST00000600659 MAPK8IP1Q9UQF2 711 aa17.01■□□□□ 0.31
RPS28-203ENST00000600659 PCDHA5Q9Y5H7 936 aa17.01■□□□□ 0.31
RPS28-203ENST00000600659 C8AP07357 584 aa17■□□□□ 0.31
RPS28-203ENST00000600659 MTHFRP42898 656 aa17■□□□□ 0.31
RPS28-203ENST00000600659 YWHAHQ04917 246 aaPredicted RBP17■□□□□ 0.31
RPS28-203ENST00000600659 NFIL3Q16649 462 aa17■□□□□ 0.31
RPS28-203ENST00000600659 CTXN3Q4LDR2 81 aa17■□□□□ 0.31
RPS28-203ENST00000600659 DSTYKQ6XUX3 929 aa17■□□□□ 0.31
RPS28-203ENST00000600659 WDR49Q8IV35 697 aa17■□□□□ 0.31
RPS28-203ENST00000600659 GOLGA5Q8TBA6 731 aa17■□□□□ 0.31
RPS28-203ENST00000600659 ZNF516Q92618 1163 aa17■□□□□ 0.31
RPS28-203ENST00000600659 RIPOR3Q96MK2 946 aa17■□□□□ 0.31
RPS28-203ENST00000600659 NECTIN4Q96NY8 510 aa17■□□□□ 0.31
RPS28-203ENST00000600659 TMEM209Q96SK2 561 aa17■□□□□ 0.31
RPS28-203ENST00000600659 POP1Q99575 1024 aaKnown RBP17■□□□□ 0.31
RPS28-203ENST00000600659 CGRRF1Q99675 332 aa17■□□□□ 0.31
RPS28-203ENST00000600659 PRKD2Q9BZL6 878 aa17■□□□□ 0.31
RPS28-203ENST00000600659 ZDHHC7Q9NXF8 308 aa17■□□□□ 0.31
RPS28-203ENST00000600659 ITGA11Q9UKX5 1188 aa17■□□□□ 0.31
RPS28-203ENST00000600659 TRIOO75962 3097 aa17■□□□□ 0.31
RPS28-203ENST00000600659 H7C4K7 107 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 SEC24AO95486 1093 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 NR3C1P04150 777 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 ODC1P11926 461 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 PAX3P23760 479 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 HOXA9P31269 272 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 COBLL1Q53SF7 1204 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 CLEC17AQ6ZS10 378 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 LRRC52Q8N7C0 313 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 OR10T2Q8NGX3 314 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 ZNF461Q8TAF7 563 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 ZNF560Q96MR9 790 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 GSDMAQ96QA5 445 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 DPP7Q9UHL4 492 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 AGAP1Q9UPQ3 857 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 PTPRDP23468 1912 aa16.99■□□□□ 0.31
RPS28-203ENST00000600659 TECTAO75443 2155 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 KPNA7A9QM74 516 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 C2CD4DB7Z1M9 353 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 CYB561D2O14569 222 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 EXOC3O60645 756 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 N4BP1O75113 896 aaKnown RBP16.98■□□□□ 0.31
RPS28-203ENST00000600659 POU2F2P09086 479 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 OR4Q2P0C623 313 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 TMEM191BP0C7N4 346 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 CLDN10P78369 228 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 MYBPC2Q14324 1141 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 SURF1Q15526 300 aa16.98■□□□□ 0.31
RPS28-203ENST00000600659 SV2CQ496J9 727 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms