RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 CYP26A1O43174 497 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 ENTPD3O75355 529 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 PROSCO94903 275 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 GJB6O95452 261 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 LSM8O95777 96 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 TMEM191BP0C7N4 346 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 MYCLP12524 364 aaPredicted RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 NPR1P16066 1061 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 GARTP22102 1010 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 STIP1P31948 543 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 NCALDP61601 193 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 BASP1P80723 227 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 XIAPP98170 497 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 GCNT1Q02742 428 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 SLC34A1Q06495 639 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 C1QBPQ07021 282 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 SF3A3Q12874 501 aaKnown RBP eCLIP3.72□□□□□ -1.81
VMP1-216ENST00000592790 PTP4A2Q12974 167 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 BIRC2Q13490 618 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 TFDP1Q14186 410 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 SNRNP35Q16560 246 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 CYP1B1Q16678 543 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 C1QTNF12Q5T7M4 302 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 TTC39BQ5VTQ0 682 aaPredicted RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 DARS2Q6PI48 645 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 THNSL1Q8IYQ7 743 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 KCTD6Q8NC69 237 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 DDI1Q8WTU0 396 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 SLC7A3Q8WY07 619 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 BTBD10Q9BSF8 475 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 DCLK3Q9C098 648 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 VPS11Q9H270 941 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 CPVLQ9H3G5 476 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 PCDH9Q9HC56 1237 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 PFDN4Q9NQP4 134 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 GINM1Q9NU53 330 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 FETUBQ9UGM5 382 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 STXBP5LQ9Y2K9 1186 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 ALS2Q96Q42 1657 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 H0Y3Z8 333 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 AP3B1O00203 1094 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 FSCN2O14926 492 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 PRPF4O43172 522 aaKnown RBP eCLIP3.72□□□□□ -1.81
VMP1-216ENST00000592790 STRNO43815 780 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 TLR2O60603 784 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 SNRPAP09012 282 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 VCAM1P19320 739 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 YARSP54577 528 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 PEX3P56589 373 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 PPARDQ03181 441 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 PDK4Q16654 411 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 KYAT1Q16773 422 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 CLEC16AQ2KHT3 1053 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 CMPK2Q5EBM0 449 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 LRRC38Q5VT99 294 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 TTBK2Q6IQ55 1244 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 KCNV1Q6PIU1 500 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 LVRNQ6Q4G3 990 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 TDRPQ86YL5 185 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 TMPRSS6Q8IU80 811 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 NUDCD3Q8IVD9 361 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 CDKL3Q8IVW4 592 aaPredicted RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 KATNAL2Q8IYT4 538 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 NLGN1Q8N2Q7 840 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 LARGE2Q8N3Y3 721 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 FEZF2Q8TBJ5 459 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 AGAP11Q8TF27 550 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 GLMNQ92990 594 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 PPP2R3CQ969Q6 453 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 TTC17Q96AE7 1141 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 ARHGEF26Q96DR7 871 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 CEP170P1Q96L14 293 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 OSGEPQ9NPF4 335 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 KCNQ5Q9NR82 932 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 SERPINA10Q9UK55 444 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 FAF1Q9UNN5 650 aaPredicted RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 NAALADL1Q9UQQ1 740 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 DRG1Q9Y295 367 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 MYH2Q9UKX2 1941 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 A6NJR5 290 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 C2CD2LO14523 706 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 DNALI1O14645 258 aaPredicted RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 MSH4O15457 936 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 DDX3YO15523 660 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 PRPSAP2O60256 369 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 H2AFYO75367 372 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 GMNNO75496 209 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 DGAT1O75907 488 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 ZBED1O96006 694 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 SERPINB2P05120 415 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 SNHG28P0DPA3 235 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 HSPA8P11142 646 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 CYP11B1P15538 503 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 PSMA2P25787 234 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 CRKP46108 304 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 NLRP11P59045 1033 aaKnown RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 ZNF200P98182 395 aaPredicted RBP3.72□□□□□ -1.81
VMP1-216ENST00000592790 PDE1BQ01064 536 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 ROR1Q01973 937 aa3.72□□□□□ -1.81
VMP1-216ENST00000592790 MTMR1Q13613 665 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms