RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 INTUQ9ULD6 942 aa4.45□□□□□ -1.7
SMAD4-207ENST00000589076 DNM3Q9UQ16 869 aa4.45□□□□□ -1.7
SMAD4-207ENST00000589076 DNAJC9-AS1A6NH13 148 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 FAM171A2A8MVW0 826 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 HTRA2O43464 458 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-207ENST00000589076 AP1G1O43747 822 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 AKR1B10O60218 316 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 CTNND1O60716 968 aaKnown RBP4.44□□□□□ -1.7
SMAD4-207ENST00000589076 DTNBO60941 627 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 RBMXL2O75526 392 aaKnown RBP4.44□□□□□ -1.7
SMAD4-207ENST00000589076 RPLP2P05387 115 aaKnown RBP4.44□□□□□ -1.7
SMAD4-207ENST00000589076 CTSSP25774 331 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 GNALP38405 381 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 SRSF4Q08170 494 aaKnown RBP4.44□□□□□ -1.7
SMAD4-207ENST00000589076 PPP3CAQ08209 521 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 FOXF2Q12947 444 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 ARHGAP29Q52LW3 1261 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 PPP4R3AQ6IN85 833 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 CCSAPQ6IQ19 270 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-207ENST00000589076 B3GNT9Q6UX72 402 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 GPR149Q86SP6 731 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 TMEM132CQ8N3T6 1108 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 ACTRT2Q8TDY3 377 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 HDAC10Q969S8 669 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 C1GALT1C1Q96EU7 318 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 LRGUKQ96M69 825 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 MAP3K14Q99558 947 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 SLC12A5Q9H2X9 1139 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 ANLNQ9NQW6 1124 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 C1orf112Q9NSG2 853 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 OBP2AQ9NY56 170 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 SERPINB13Q9UIV8 391 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 LIMCH1Q9UPQ0 1083 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 IPPQ9Y573 584 aa4.44□□□□□ -1.7
SMAD4-207ENST00000589076 CCDC154A6NI56 674 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 VSTM5A8MXK1 200 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 MATN4O95460 622 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 KRT18P05783 430 aaKnown RBP4.43□□□□□ -1.7
SMAD4-207ENST00000589076 EDNRBP24530 442 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 PTPN7P35236 360 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 MGAT2Q10469 447 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 NOMO1Q15155 1222 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 FAM47AQ5JRC9 791 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 MED25Q71SY5 747 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 CATIPQ7Z7H3 387 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 DGKHQ86XP1 1220 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 CCAR1Q8IX12 1150 aaKnown RBP4.43□□□□□ -1.7
SMAD4-207ENST00000589076 COLGALT2Q8IYK4 626 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMAD4-207ENST00000589076 MVB12AQ96EY5 273 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 BOD1Q96IK1 185 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 C7orf25Q9BPX7 421 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 AIFM2Q9BRQ8 373 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 GTPBP4Q9BZE4 634 aaKnown RBP4.43□□□□□ -1.7
SMAD4-207ENST00000589076 KLHL11Q9NVR0 708 aa4.43□□□□□ -1.7
SMAD4-207ENST00000589076 CFAP20Q9Y6A4 193 aaKnown RBP4.43□□□□□ -1.7
SMAD4-207ENST00000589076 TMEM127O75204 238 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 ENDOD1O94919 500 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 ZFPL1O95159 310 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 ZNF81P51508 661 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 GBX1Q14549 363 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 PGS1Q32NB8 556 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 PRAMEF14Q5SWL7 426 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 ABHD15Q6UXT9 468 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 MIGA2Q7L4E1 593 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 PTF1AQ7RTS3 328 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 GRASPQ7Z6J2 395 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-207ENST00000589076 DRC7Q8IY82 874 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 DPF2Q92785 391 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 RUNDC1Q96C34 613 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 PTCD3Q96EY7 689 aaKnown RBP4.42□□□□□ -1.7
SMAD4-207ENST00000589076 CYFIP2Q96F07 1278 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 TAAR9Q96RI9 348 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 DMRT3Q9NQL9 472 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 GABBR1Q9UBS5 961 aa4.42□□□□□ -1.7
SMAD4-207ENST00000589076 MTO1Q9Y2Z2 717 aaKnown RBP4.42□□□□□ -1.7
SMAD4-207ENST00000589076 A0A1B0GTW7 788 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 CCDC194A0A1B0GVG4 234 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 SGTAO43765 313 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 GPANK1O95872 356 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 ECHS1P30084 290 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 ADSLP30566 484 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-207ENST00000589076 RAP2BP61225 183 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 CXADRP78310 365 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 MAPK7Q13164 816 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 ZNF267Q14586 743 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-207ENST00000589076 THEMIS2Q5TEJ8 643 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 SLC4A10Q6U841 1118 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 TTC7BQ86TV6 843 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 CCDC146Q8IYE0 955 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 GRAMD1CQ8IYS0 662 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 DIS3LQ8TF46 1054 aaKnown RBP4.41□□□□□ -1.7
SMAD4-207ENST00000589076 CEP95Q96GE4 821 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 MANSC1Q9H8J5 431 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 BCO1Q9HAY6 547 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 MAN1C1Q9NR34 630 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 TMEM74BQ9NUR3 256 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 MOCS1Q9NZB8 636 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 SALL3Q9BXA9 1300 aa4.41□□□□□ -1.7
SMAD4-207ENST00000589076 CCDC151A5D8V7 595 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms