RNA–Protein interactions for RNA: ENST00000588580.6

SUGP1-208, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 2

Gene SUGP1, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-208ENST00000588580 SURF1Q15526 300 aa17.1■□□□□ 0.33
SUGP1-208ENST00000588580 LMBRD2Q68DH5 695 aaPredicted RBP17.1■□□□□ 0.33
SUGP1-208ENST00000588580 LRSAM1Q6UWE0 723 aa17.1■□□□□ 0.33
SUGP1-208ENST00000588580 INTS8Q75QN2 995 aaKnown RBP17.1■□□□□ 0.33
SUGP1-208ENST00000588580 NT5DC4Q86YG4 428 aa17.1■□□□□ 0.33
SUGP1-208ENST00000588580 WDR49Q8IV35 697 aa17.1■□□□□ 0.33
SUGP1-208ENST00000588580 OR5B17Q8NGF7 314 aa17.1■□□□□ 0.33
SUGP1-208ENST00000588580 CXorf38Q8TB03 319 aa17.1■□□□□ 0.33
SUGP1-208ENST00000588580 PPP2R3CQ969Q6 453 aa17.1■□□□□ 0.33
SUGP1-208ENST00000588580 PAAF1Q9BRP4 392 aa17.1■□□□□ 0.33
SUGP1-208ENST00000588580 HSD3B7Q9H2F3 369 aa17.1■□□□□ 0.33
SUGP1-208ENST00000588580 GOLGA2P5Q9HBQ8 144 aa17.1■□□□□ 0.33
SUGP1-208ENST00000588580 INTS13Q9NVM9 706 aa17.1■□□□□ 0.33
SUGP1-208ENST00000588580 CACNG4Q9UBN1 327 aa17.1■□□□□ 0.33
SUGP1-208ENST00000588580 CYP3A5P20815 502 aa17.09■□□□□ 0.33
SUGP1-208ENST00000588580 SLC11A1P49279 550 aa17.09■□□□□ 0.33
SUGP1-208ENST00000588580 GUCY2FP51841 1108 aa17.09■□□□□ 0.33
SUGP1-208ENST00000588580 RNASELQ05823 741 aaKnown RBP17.09■□□□□ 0.33
SUGP1-208ENST00000588580 IQCB1Q15051 598 aa17.09■□□□□ 0.33
SUGP1-208ENST00000588580 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
SUGP1-208ENST00000588580 CDKAL1Q5VV42 579 aa17.09■□□□□ 0.33
SUGP1-208ENST00000588580 TRIM59Q8IWR1 403 aa17.09■□□□□ 0.33
SUGP1-208ENST00000588580 DHX40Q8IX18 779 aaKnown RBP17.09■□□□□ 0.33
SUGP1-208ENST00000588580 ZNF516Q92618 1163 aa17.09■□□□□ 0.33
SUGP1-208ENST00000588580 CCDC127Q96BQ5 260 aa17.09■□□□□ 0.33
SUGP1-208ENST00000588580 CNOT6LQ96LI5 555 aaKnown RBP17.09■□□□□ 0.33
SUGP1-208ENST00000588580 TMEM175Q9BSA9 504 aa17.09■□□□□ 0.33
SUGP1-208ENST00000588580 THAP9Q9H5L6 903 aa17.09■□□□□ 0.33
SUGP1-208ENST00000588580 SLC38A7Q9NVC3 462 aa17.09■□□□□ 0.33
SUGP1-208ENST00000588580 UBQLN1Q9UMX0 589 aaKnown RBP17.09■□□□□ 0.33
SUGP1-208ENST00000588580 NFE2L3Q9Y4A8 694 aa17.09■□□□□ 0.33
SUGP1-208ENST00000588580 CASTOR2A6NHX0 329 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 F8W810 466 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 IKBKBO14920 756 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 ZC3H11AO75152 810 aaKnown RBP eCLIP17.08■□□□□ 0.32
SUGP1-208ENST00000588580 GALTP07902 379 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 TRIM49P0CI25 452 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 TRIM49CP0CI26 452 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 DLATP10515 647 aaKnown RBP17.08■□□□□ 0.32
SUGP1-208ENST00000588580 LAG3P18627 525 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 IGFBP6P24592 240 aaPredicted RBP17.08■□□□□ 0.32
SUGP1-208ENST00000588580 LRPAP1P30533 357 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 PBX3P40426 434 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 ZNF165P49910 485 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 VAMP7P51809 220 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 SCARA3Q6AZY7 606 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 FRMD5Q7Z6J6 570 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 TMEM173Q86WV6 379 aaPredicted RBP17.08■□□□□ 0.32
SUGP1-208ENST00000588580 AOPEPQ8N6M6 819 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 C1orf127Q8N9H9 656 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 COLGALT1Q8NBJ5 622 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 BCL7CQ8WUZ0 217 aaPredicted RBP17.08■□□□□ 0.32
SUGP1-208ENST00000588580 POF1BQ8WVV4 589 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 SUSD6Q92537 303 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 MTMR12Q9C0I1 747 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 NAT10Q9H0A0 1025 aaKnown RBP17.08■□□□□ 0.32
SUGP1-208ENST00000588580 SAMSN1Q9NSI8 373 aaKnown RBP17.08■□□□□ 0.32
SUGP1-208ENST00000588580 MARCH5Q9NX47 278 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 ARMCX3Q9UH62 379 aaPredicted RBP17.08■□□□□ 0.32
SUGP1-208ENST00000588580 PCDHGC5Q9Y5F6 944 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.08■□□□□ 0.32
SUGP1-208ENST00000588580 DMDP11532 3685 aa17.08■□□□□ 0.32
SUGP1-208ENST00000588580 ANO9A1A5B4 782 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 PPEF2O14830 753 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 FGFR1OPO95684 399 aaKnown RBP17.07■□□□□ 0.32
SUGP1-208ENST00000588580 GNA14O95837 355 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 ZNF18P17022 549 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 BCAR1P56945 870 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 RBM10P98175 930 aaKnown RBP17.07■□□□□ 0.32
SUGP1-208ENST00000588580 PPP3CAQ08209 521 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 UPP1Q16831 310 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 KCNT2Q6UVM3 1135 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 CD300LGQ6UXG3 332 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 C15orf39Q6ZRI6 1047 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 SLC39A11Q8N1S5 342 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 KLHL23Q8NBE8 558 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 C3orf58Q8NDZ4 430 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 BEST2Q8NFU1 509 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 SLC35C1Q96A29 364 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 UROC1Q96N76 676 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 CBX8Q9HC52 389 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 METTL14Q9HCE5 456 aaKnown RBP17.07■□□□□ 0.32
SUGP1-208ENST00000588580 SIX4Q9UIU6 781 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 VPS13AQ96RL7 3174 aa17.07■□□□□ 0.32
SUGP1-208ENST00000588580 TMEM189-UBE2V1I3L0A0 370 aa17.06■□□□□ 0.32
SUGP1-208ENST00000588580 NRP1O14786 923 aa17.06■□□□□ 0.32
SUGP1-208ENST00000588580 PER2O15055 1255 aa17.06■□□□□ 0.32
SUGP1-208ENST00000588580 XPOTO43592 962 aaKnown RBP17.06■□□□□ 0.32
SUGP1-208ENST00000588580 CAVIN2O95810 425 aa17.06■□□□□ 0.32
SUGP1-208ENST00000588580 EFEMP2O95967 443 aa17.06■□□□□ 0.32
SUGP1-208ENST00000588580 KRT13P13646 458 aa17.06■□□□□ 0.32
SUGP1-208ENST00000588580 CLCNKBP51801 687 aa17.06■□□□□ 0.32
SUGP1-208ENST00000588580 TFAMQ00059 246 aaKnown RBP17.06■□□□□ 0.32
SUGP1-208ENST00000588580 CCDC40Q4G0X9 1142 aa17.06■□□□□ 0.32
SUGP1-208ENST00000588580 TDRD10Q5VZ19 366 aaKnown RBP17.06■□□□□ 0.32
SUGP1-208ENST00000588580 TMEM105Q8N8V8 129 aa17.06■□□□□ 0.32
SUGP1-208ENST00000588580 ZNF558Q96NG5 402 aa17.06■□□□□ 0.32
SUGP1-208ENST00000588580 FNBP1Q96RU3 617 aa17.06■□□□□ 0.32
SUGP1-208ENST00000588580 TLE6Q9H808 572 aa17.06■□□□□ 0.32
SUGP1-208ENST00000588580 DPP3Q9NY33 737 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms