RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 NRIP1P48552 1158 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 TAF6P49848 677 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 PPP3CAQ08209 521 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 ADAM15Q13444 863 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 ZACNQ401N2 412 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 TDRD10Q5VZ19 366 aaKnown RBP23.33■■□□□ 1.33
TSEN54-208ENST00000583173 PRSS55Q6UWB4 352 aaPredicted RBP23.33■■□□□ 1.33
TSEN54-208ENST00000583173 SV2AQ7L0J3 742 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 LIMS2Q7Z4I7 341 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 FRMD5Q7Z6J6 570 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 IRF2BP1Q8IU81 584 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 SLC22A17Q8WUG5 538 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 CDCA3Q99618 268 aaPredicted RBP23.33■■□□□ 1.33
TSEN54-208ENST00000583173 SRRTQ9BXP5 876 aaKnown RBP23.33■■□□□ 1.33
TSEN54-208ENST00000583173 GDAP2Q9NXN4 497 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 PRUNE2Q8WUY3 3088 aa23.32■■□□□ 1.32
TSEN54-208ENST00000583173 SPTBN5Q9NRC6 3674 aaKnown RBP23.32■■□□□ 1.32
TSEN54-208ENST00000583173 KPNA7A9QM74 516 aa23.32■■□□□ 1.32
TSEN54-208ENST00000583173 OAZ2O95190 189 aa23.32■■□□□ 1.32
TSEN54-208ENST00000583173 CYP11A1P05108 521 aa23.32■■□□□ 1.32
TSEN54-208ENST00000583173 PNPLA4P41247 253 aa23.32■■□□□ 1.32
TSEN54-208ENST00000583173 MARSP56192 900 aaKnown RBP23.32■■□□□ 1.32
TSEN54-208ENST00000583173 KIAA1841Q6NSI8 718 aa23.32■■□□□ 1.32
TSEN54-208ENST00000583173 RSPO2Q6UXX9 243 aaPredicted RBP23.32■■□□□ 1.32
TSEN54-208ENST00000583173 TMEM184AQ6ZMB5 413 aa23.32■■□□□ 1.32
TSEN54-208ENST00000583173 RBM23Q86U06 439 aaKnown RBP23.32■■□□□ 1.32
TSEN54-208ENST00000583173 CEP57Q86XR8 500 aa23.32■■□□□ 1.32
TSEN54-208ENST00000583173 MICALL1Q8N3F8 863 aa23.32■■□□□ 1.32
TSEN54-208ENST00000583173 EFHBQ8N7U6 833 aa23.32■■□□□ 1.32
TSEN54-208ENST00000583173 CLSTN3Q9BQT9 956 aa23.32■■□□□ 1.32
TSEN54-208ENST00000583173 XYLT2Q9H1B5 865 aa23.32■■□□□ 1.32
TSEN54-208ENST00000583173 BACE2Q9Y5Z0 518 aa23.32■■□□□ 1.32
TSEN54-208ENST00000583173 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.31■■□□□ 1.32
TSEN54-208ENST00000583173 TULP1O00294 542 aaPredicted RBP23.31■■□□□ 1.32
TSEN54-208ENST00000583173 C2CD2LO14523 706 aa23.31■■□□□ 1.32
TSEN54-208ENST00000583173 TEX28O15482 410 aa23.31■■□□□ 1.32
TSEN54-208ENST00000583173 NCK2O43639 380 aa23.31■■□□□ 1.32
TSEN54-208ENST00000583173 STAU1O95793 577 aaKnown RBP23.31■■□□□ 1.32
TSEN54-208ENST00000583173 C1RP00736 705 aa23.31■■□□□ 1.32
TSEN54-208ENST00000583173 TRIM49P0CI25 452 aa23.31■■□□□ 1.32
TSEN54-208ENST00000583173 TRIM49CP0CI26 452 aa23.31■■□□□ 1.32
TSEN54-208ENST00000583173 KRT13P13646 458 aa23.31■■□□□ 1.32
TSEN54-208ENST00000583173 TYMPP19971 482 aa23.31■■□□□ 1.32
TSEN54-208ENST00000583173 GTF2H1P32780 548 aa23.31■■□□□ 1.32
TSEN54-208ENST00000583173 LTBRP36941 435 aa23.31■■□□□ 1.32
TSEN54-208ENST00000583173 VARS2Q5ST30 1063 aaKnown RBP23.31■■□□□ 1.32
TSEN54-208ENST00000583173 VN1R2Q8NFZ6 395 aa23.31■■□□□ 1.32
TSEN54-208ENST00000583173 METTL14Q9HCE5 456 aaKnown RBP23.31■■□□□ 1.32
TSEN54-208ENST00000583173 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.31■■□□□ 1.32
TSEN54-208ENST00000583173 MTRRQ9UBK8 725 aa23.31■■□□□ 1.32
TSEN54-208ENST00000583173 VWA8A3KMH1 1905 aa23.31■■□□□ 1.32
TSEN54-208ENST00000583173 ADAM12O43184 909 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 NFKBIBQ15653 356 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 SKOR2Q2VWA4 1001 aaPredicted RBP23.3■■□□□ 1.32
TSEN54-208ENST00000583173 PDXDC1Q6P996 788 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 LILRA6Q6PI73 481 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 SASS6Q6UVJ0 657 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 DSTYKQ6XUX3 929 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 USP37Q86T82 979 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 APPL2Q8NEU8 664 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 PPM1EQ8WY54 764 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 PPP2R3CQ969Q6 453 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 HPDLQ96IR7 371 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 ZNF560Q96MR9 790 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 VRTNQ9H8Y1 702 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 ARMCX3Q9UH62 379 aaPredicted RBP23.3■■□□□ 1.32
TSEN54-208ENST00000583173 DACH1Q9UI36 760 aa23.3■■□□□ 1.32
TSEN54-208ENST00000583173 CYB561D2O14569 222 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 LINC01565O15544 149 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 GNA14O95837 355 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 GLP2RO95838 553 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 KRT19P08727 400 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 MYL6P60660 151 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 PSMD5Q16401 504 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 SV2CQ496J9 727 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 ANKS3Q6ZW76 656 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 SLC35C1Q96A29 364 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 SYAP1Q96A49 352 aaPredicted RBP23.29■■□□□ 1.32
TSEN54-208ENST00000583173 PABPC5Q96DU9 382 aaKnown RBP23.29■■□□□ 1.32
TSEN54-208ENST00000583173 FUCA2Q9BTY2 467 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 EMILIN2Q9BXX0 1053 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 IGFLR1Q9H665 355 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 TMEM8AQ9HCN3 771 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 ANO10Q9NW15 660 aa23.29■■□□□ 1.32
TSEN54-208ENST00000583173 TIMM13Q9Y5L4 95 aaPredicted RBP23.29■■□□□ 1.32
TSEN54-208ENST00000583173 RPL17P18621 184 aaKnown RBP23.28■■□□□ 1.32
TSEN54-208ENST00000583173 ATICP31939 592 aa23.28■■□□□ 1.32
TSEN54-208ENST00000583173 GCLMP48507 274 aa23.28■■□□□ 1.32
TSEN54-208ENST00000583173 CLCN4P51793 760 aa23.28■■□□□ 1.32
TSEN54-208ENST00000583173 RBM10P98175 930 aaKnown RBP23.28■■□□□ 1.32
TSEN54-208ENST00000583173 RAB33AQ14088 237 aa23.28■■□□□ 1.32
TSEN54-208ENST00000583173 TRIM59Q8IWR1 403 aa23.28■■□□□ 1.32
TSEN54-208ENST00000583173 ENOX1Q8TC92 643 aaKnown RBP23.28■■□□□ 1.32
TSEN54-208ENST00000583173 PMM2O15305 246 aa23.27■■□□□ 1.32
TSEN54-208ENST00000583173 FGFR1OPO95684 399 aaKnown RBP23.27■■□□□ 1.32
TSEN54-208ENST00000583173 FAM163BP0C2L3 166 aa23.27■■□□□ 1.32
TSEN54-208ENST00000583173 CREMQ03060 361 aa23.27■■□□□ 1.32
TSEN54-208ENST00000583173 TYRO3Q06418 890 aa23.27■■□□□ 1.32
TSEN54-208ENST00000583173 MYO1EQ12965 1108 aa23.27■■□□□ 1.32
TSEN54-208ENST00000583173 NCOA4Q13772 614 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms