RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 SARS2Q9NP81 518 aaKnown RBP5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 GPRC5BQ9NZH0 403 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 FZD1Q9UP38 647 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 MTO1Q9Y2Z2 717 aaKnown RBP5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 A0A088AWK7 358 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 CCDC78A2IDD5 438 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 PRSS29PA6NIE9 313 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 ERN1O75460 977 aaKnown RBP5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 TUSC2O75896 110 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 AHSGP02765 367 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 ELANEP08246 267 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 C6P13671 934 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 ZFP36P26651 326 aaKnown RBP5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 RESTQ13127 1097 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 FGL2Q14314 439 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 KHDC1LQ5JSQ8 128 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 B3GNTL1Q67FW5 361 aaPredicted RBP5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 LRRC55Q6ZSA7 311 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 PDSS2Q86YH6 399 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 CPEB3Q8NE35 698 aaKnown RBP5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 BRIX1Q8TDN6 353 aaKnown RBP5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 LENG9Q96B70 501 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 MYEOVQ96EZ4 313 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 MMRN2Q9H8L6 949 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 RLIMQ9NVW2 624 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 RNF181Q9P0P0 153 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 HSFX1Q9UBD0 423 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 STAP2Q9UGK3 403 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 ZDHHC8Q9ULC8 765 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 PCDHA6Q9UN73 950 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 CDYLQ9Y232 598 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 NOX1Q9Y5S8 564 aa5.78□□□□□ -1.48
SMCHD1-204ENST00000581226 ZNF785A8K8V0 405 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 NARSO43776 548 aaKnown RBP5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 ZNF202O95125 648 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 MATN4O95460 622 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 RARBP10826 455 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 MAKP20794 623 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 TACR2P21452 398 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 DDX6P26196 483 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 BMPR1AP36894 532 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 RAB1AP62820 205 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 KIF22Q14807 665 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 LLGL1Q15334 1064 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 ANO6Q4KMQ2 910 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 IGFL4Q6B9Z1 124 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 NPNTQ6UXI9 565 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 MRGPREQ86SM8 312 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 PDPRQ8NCN5 879 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 SCAMP4Q969E2 229 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 RNF31Q96EP0 1072 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 MED15Q96RN5 788 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 B3GNT5Q9BYG0 378 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 CNNM1Q9NRU3 951 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 DDX20Q9UHI6 824 aaKnown RBP5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 CPA4Q9UI42 421 aa5.77□□□□□ -1.49
SMCHD1-204ENST00000581226 UNC119BA6NIH7 251 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 TMEM200CA6NKL6 621 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 LPXNO60711 386 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 ABHD16AO95870 558 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 GNAI2P04899 355 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 AGFG1P52594 562 aaKnown RBP5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 CXADRP78310 365 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 ZXDAP98168 799 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 EXOSC9Q06265 439 aaKnown RBP5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 ZNF844Q08AG5 666 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 KCNV1Q6PIU1 500 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 FAM43AQ8N2R8 423 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 NSUN7Q8NE18 718 aaKnown RBP5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 PROKR1Q8TCW9 393 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 NT5C1BQ96P26 610 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 ALOXE3Q9BYJ1 711 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 TMEM60Q9H2L4 133 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 FAM204AQ9H8W3 233 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 RSAD1Q9HA92 442 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 OBP2AQ9NY56 170 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 ANKFY1Q9P2R3 1169 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 KCNE5Q9UJ90 142 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 HS3ST3A1Q9Y663 406 aa5.76□□□□□ -1.49
SMCHD1-204ENST00000581226 FRMPD2Q68DX3 1309 aaPredicted RBP5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 CENPVL1A0A0U1RR11 272 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 CAPN8A6NHC0 703 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 MARCH11A6NNE9 402 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 E9PLN8 166 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 MARCH6O60337 910 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 FZD7O75084 574 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 CDKL5O76039 1030 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 HDCP19113 662 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 MCM7P33993 719 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 ZNF135P52742 658 aaPredicted RBP5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 SOX8P57073 446 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 GPSM2P81274 684 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 GUCY1B3Q02153 619 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 PIGFQ07326 219 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 HABP2Q14520 560 aaPredicted RBP5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 GRM3Q14832 879 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 CRB2Q5IJ48 1285 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 LY6G5CQ5SRR4 150 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms