RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 RANBP2P49792 3224 aaKnown RBP14.96□□□□□ -0.02
CSNK1D-209ENST00000578904 FNDC1Q4ZHG4 1894 aaPredicted RBP14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 PTGESO14684 152 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 ARHGAP6O43182 974 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 CCP110O43303 1012 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 THP07101 528 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 NFICP08651 508 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 PAX3P23760 479 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 MSNP26038 577 aaKnown RBP14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 HNRNPH3P31942 346 aaKnown RBP14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 PNPLA4P41247 253 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 AFF1P51825 1210 aaKnown RBP14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 NOP14P78316 857 aaKnown RBP14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 ASIC2Q16515 512 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 ZNF699Q32M78 642 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 SPOUT1Q5T280 376 aaKnown RBP14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 TTC39CQ8N584 583 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 SP7Q8TDD2 431 aaPredicted RBP14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 ZNF560Q96MR9 790 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 FAM193BQ96PV7 902 aaPredicted RBP14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 CXCL16Q9H2A7 254 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 SIX2Q9NPC8 291 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 TBC1D13Q9NVG8 400 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 MIOSQ9NXC5 875 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 AIPL1Q9NZN9 384 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 MSRAQ9UJ68 235 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 FHOD1Q9Y613 1164 aa14.95□□□□□ -0.02
CSNK1D-209ENST00000578904 PTPRJQ12913 1337 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 TRIOBPQ9H2D6 2365 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 SMIM28A0A1B0GU29 152 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 LCHNA4D1U4 455 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 LRRC53A6NM62 1247 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 STAU1O95793 577 aaKnown RBP14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 ASS1P00966 412 aaKnown RBP14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 ITGB3P05106 788 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 SERPING1P05155 500 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 CA3P07451 260 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 MYOGP15173 224 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 CYLC1P35663 651 aaPredicted RBP14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 PBX2P40425 430 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 WNT7BP56706 349 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 BPIFB4P59827 614 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 SMAD3P84022 425 aaKnown RBP14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 LRMPQ12912 555 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 DRAP1Q14919 205 aaPredicted RBP14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 ZNF667Q5HYK9 610 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 IQCEQ6IPM2 695 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 CCDC170Q8IYT3 715 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 TXLNBQ8N3L3 684 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 FIBCD1Q8N539 461 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 LRRC52Q8N7C0 313 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 GSTCDQ8NEC7 633 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 BAP1Q92560 729 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 SEMA4DQ92854 862 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 ZMAT2Q96NC0 199 aaKnown RBP14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 PBX4Q9BYU1 374 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 DEF6Q9H4E7 631 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 LUC7LQ9NQ29 371 aaKnown RBP14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 HCSTQ9UBK5 93 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 ZKSCAN5Q9Y2L8 839 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 MRPL42Q9Y6G3 142 aaKnown RBP14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 GBF1Q92538 1859 aa14.94□□□□□ -0.02
CSNK1D-209ENST00000578904 EPHB6O15197 1021 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 VNN1O95497 513 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 FECHP22830 423 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 ANXA13P27216 316 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 SOX5P35711 763 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 ZBTB6Q15916 424 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 MEA1Q16626 185 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 ARHGAP44Q17R89 818 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 LRIT3Q3SXY7 679 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 PHLDB3Q6NSJ2 640 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 C1orf127Q8N9H9 656 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 DDX27Q96GQ7 796 aaKnown RBP14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 CCDC42Q96M95 316 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 PPP1R10Q96QC0 940 aaKnown RBP14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 NIF3L1Q9GZT8 377 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 NKX2-4Q9H2Z4 354 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 VRTNQ9H8Y1 702 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 AGAP1Q9UPQ3 857 aa14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 YBX2Q9Y2T7 364 aaKnown RBP14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.93□□□□□ -0.02
CSNK1D-209ENST00000578904 SSU72P8A0A1W2PR75 194 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 LINC01553A4QN01 128 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 F8VZ95 297 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 LAG3P18627 525 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 KCNA4P22459 653 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 DNAJB2P25686 324 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 POLR2BP30876 1174 aaKnown RBP14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 RPL9P32969 192 aaKnown RBP14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 JAM2P57087 298 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 MYL6P60660 151 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 TNNC1P63316 161 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 KLHL30Q0D2K2 578 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 TUSC3Q13454 348 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 CUL2Q13617 745 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 TDRD12Q587J7 1177 aaKnown RBP14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 DPY19L2P1Q6NXN4 242 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 ZSCAN30Q86W11 494 aa14.92□□□□□ -0.02
CSNK1D-209ENST00000578904 ZNF280BQ86YH2 543 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms