RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 PDGFBP01127 241 aaPredicted RBP13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 GARTP22102 1010 aa13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 NTHL1P78549 312 aa13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 EHHADHQ08426 723 aa13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 FOXD4L5Q5VV16 416 aaPredicted RBP13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 EFCAB13Q8IY85 973 aa13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 SLC44A3Q8N4M1 653 aa13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 RSAD2Q8WXG1 361 aa13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 FOXD4L4Q8WXT5 416 aaPredicted RBP13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 FGF13Q92913 245 aa13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 PRRX2Q99811 253 aa13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 TMEM206Q9H813 350 aa13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 DNMT3BQ9UBC3 853 aaKnown RBP13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 RCOR1Q9UKL0 485 aa13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 PCDHA7Q9UN72 937 aa13.49□□□□□ -0.25
CSNK1D-206ENST00000577578 OR6C75A6NL08 312 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 IL18RAPO95256 599 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 LDHAP00338 332 aaKnown RBP13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 CYP11A1P05108 521 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 AVPR2P30518 371 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 ELF1P32519 619 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 NUBP1P53384 320 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 VCPP55072 806 aaKnown RBP13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 AMPD3Q01432 767 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 DNM1Q05193 864 aaKnown RBP13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 PABPC1LQ4VXU2 614 aaKnown RBP13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 IER5LQ5T953 404 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 RESP18Q5W5W9 173 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 EPM2AIP1Q7L775 607 aaPredicted RBP13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 BRSK2Q8IWQ3 736 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 NPAS3Q8IXF0 933 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 ITFG1Q8TB96 612 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 DHX58Q96C10 678 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 FAM212AQ96EL1 285 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 C7orf25Q9BPX7 421 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 HCFC1R1Q9NWW0 138 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 WNT16Q9UBV4 365 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 POLIQ9UNA4 740 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 TIMM13Q9Y5L4 95 aaPredicted RBP13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 INSL5Q9Y5Q6 135 aa13.48□□□□□ -0.25
CSNK1D-206ENST00000577578 PRRG1O14668 218 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 KIAA0391O15091 583 aaKnown RBP13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 EIF3DO15371 548 aaKnown RBP eCLIP13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 POLR2DO15514 142 aaKnown RBP13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 NARSO43776 548 aaKnown RBP13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 EXTL3O43909 919 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 MICAL2O94851 1124 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 PRPF6O94906 941 aaKnown RBP13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 VNN2O95498 520 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 LRG1P02750 347 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 RHOP08100 348 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 SRFP11831 508 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 ODC1P11926 461 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 HOXD13P35453 343 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 ME1P48163 572 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 CLCN5P51795 746 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 ARPP19P56211 112 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 WNT7BP56706 349 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 GPR17Q13304 367 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 MYBPC2Q14324 1141 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 DSTYKQ6XUX3 929 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 RNF19BQ6ZMZ0 732 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 STXBP4Q6ZWJ1 553 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 USP37Q86T82 979 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 GLIS3Q8NEA6 775 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 ZSWIM2Q8NEG5 633 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 FGF14Q92915 247 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 BORCS6Q96GS4 357 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 SENP8Q96LD8 212 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 CBWD1Q9BRT8 395 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 FAM213AQ9BRX8 229 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 CYP4F11Q9HBI6 524 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 SLC2A4RGQ9NR83 387 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 DPP3Q9NY33 737 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 ZDHHC9Q9Y397 364 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 NUMBLQ9Y6R0 609 aa13.47□□□□□ -0.25
CSNK1D-206ENST00000577578 MYO15AQ9UKN7 3530 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 CPB1P15086 417 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 NPR3P17342 541 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 PTPN2P17706 415 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 EPHA5P54756 1037 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 NHLH1Q02575 133 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 ADCY1Q08828 1119 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 SLC5A9Q2M3M2 681 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 FOXD4L6Q3SYB3 417 aaPredicted RBP13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 PRSS36Q5K4E3 855 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 CWF19L1Q69YN2 538 aaKnown RBP13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 OVOS1Q6IE37 1185 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 FOXD4L3Q6VB84 417 aaPredicted RBP13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 UNC13DQ70J99 1090 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 MTSS1LQ765P7 747 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 SYCP3Q8IZU3 236 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 PRSS33Q8NF86 280 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 CXorf38Q8TB03 319 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 ZNF507Q8TCN5 953 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 HPS3Q969F9 1004 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 SAAL1Q96ER3 474 aa13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 PYM1Q9BRP8 204 aaKnown RBP13.46□□□□□ -0.25
CSNK1D-206ENST00000577578 FAM13BQ9NYF5 915 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms