RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 USP25Q9UHP3 1055 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 OGDHLQ9ULD0 1010 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 MED16Q9Y2X0 877 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 NOX1Q9Y5S8 564 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 CCDC194A0A1B0GVG4 234 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 TCRBV7S2A1N4TA0A589 114 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 KLRG2A4D1S0 409 aaPredicted RBP3.13□□□□□ -1.91
COPS3-213ENST00000577210 CDHR4A6H8M9 788 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 C1QTNF3-AMACRE9PGA6 284 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 TBC1D4O60343 1298 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 ERN1O75460 977 aaKnown RBP3.13□□□□□ -1.91
COPS3-213ENST00000577210 STC2O76061 302 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 INMTO95050 263 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 MAP4K4O95819 1239 aaPredicted RBP3.13□□□□□ -1.91
COPS3-213ENST00000577210 MYF5P13349 255 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 PEX2P28328 305 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 WNT3P56703 355 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 SOX8P57073 446 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 BTKQ06187 659 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 SEMA5AQ13591 1074 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 COBLL1Q53SF7 1204 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 UTP14CQ5TAP6 766 aaKnown RBP3.13□□□□□ -1.91
COPS3-213ENST00000577210 AGAP9Q5VTM2 703 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 FAM160B1Q5W0V3 765 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 ANKS6Q68DC2 871 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 LMBRD2Q68DH5 695 aaPredicted RBP3.13□□□□□ -1.91
COPS3-213ENST00000577210 ZNF585AQ6P3V2 769 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 UBE3BQ7Z3V4 1068 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 CLNKQ7Z7G1 428 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 DPP9Q86TI2 863 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 SH2D3CQ8N5H7 860 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 SMCR8Q8TEV9 937 aaPredicted RBP3.13□□□□□ -1.91
COPS3-213ENST00000577210 ANKS1AQ92625 1134 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 APIPQ96GX9 242 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 TNIP3Q96KP6 325 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 C8orf49Q96NF6 230 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 STRBPQ96SI9 672 aaKnown RBP3.13□□□□□ -1.91
COPS3-213ENST00000577210 NELL2Q99435 816 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 EIF2AQ9BY44 585 aaKnown RBP3.13□□□□□ -1.91
COPS3-213ENST00000577210 UNKQ9C0B0 810 aaKnown RBP3.13□□□□□ -1.91
COPS3-213ENST00000577210 ZNF518BQ9C0D4 1074 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 ZCWPW1Q9H0M4 648 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 ARMT1Q9H993 441 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 ZNF287Q9HBT7 754 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 SLC52A1Q9NWF4 448 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 AFF4Q9UHB7 1163 aaKnown RBP3.13□□□□□ -1.91
COPS3-213ENST00000577210 KCNE5Q9UJ90 142 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 PADI4Q9UM07 663 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 PCDHA1Q9Y5I3 950 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 FPGT-TNNI3KV9GXZ4 949 aa3.13□□□□□ -1.91
COPS3-213ENST00000577210 A0A1B0GTW7 788 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 CCDC195A0A1B0GUA6 201 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 MYADML2A6NDP7 307 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 AGFG2O95081 481 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 SCAF4O95104 1147 aaKnown RBP3.12□□□□□ -1.91
COPS3-213ENST00000577210 GPANK1O95872 356 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 ITGB1P05556 798 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 IFIT2P09913 472 aaKnown RBP3.12□□□□□ -1.91
COPS3-213ENST00000577210 INSRRP14616 1297 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 ZNF20P17024 532 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 LAG3P18627 525 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 EN2P19622 333 aaPredicted RBP3.12□□□□□ -1.91
COPS3-213ENST00000577210 SLC7A1P30825 629 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 BMPR1AP36894 532 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 CHN2P52757 468 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 USP14P54578 494 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 AK2P54819 239 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 NOMO3P69849 1222 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 TCF15Q12870 199 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 CNGA2Q16280 664 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 FAM102AQ5T9C2 384 aaPredicted RBP3.12□□□□□ -1.91
COPS3-213ENST00000577210 TSHZ3Q63HK5 1081 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 SPTY2D1Q68D10 685 aaPredicted RBP3.12□□□□□ -1.91
COPS3-213ENST00000577210 SFRP4Q6FHJ7 346 aaPredicted RBP3.12□□□□□ -1.91
COPS3-213ENST00000577210 LAYNQ6UX15 382 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 C1orf210Q8IVY1 113 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 SAMD3Q8N6K7 520 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 DCBLD1Q8N8Z6 715 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 RNF169Q8NCN4 708 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 FAM156AQ8NDB6 213 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 ACRBPQ8NEB7 543 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 FBXO18Q8NFZ0 1043 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 PPP1R35Q8TAP8 253 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 CPT1CQ8TCG5 803 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 BOD1Q96IK1 185 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 MSLNLQ96KJ4 702 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 PHACTR3Q96KR7 559 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 GPR20Q99678 358 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 LRFN3Q9BTN0 628 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 SELENOOQ9BVL4 669 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 CPEB1Q9BZB8 566 aaKnown RBP3.12□□□□□ -1.91
COPS3-213ENST00000577210 IMPG2Q9BZV3 1241 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 PNPLA8Q9NP80 782 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 TRPM5Q9NZQ8 1165 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 ST6GALNAC2Q9UJ37 374 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 PCDHA6Q9UN73 950 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 SORCS3Q9UPU3 1222 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 MTO1Q9Y2Z2 717 aaKnown RBP3.12□□□□□ -1.91
COPS3-213ENST00000577210 TMX2Q9Y320 296 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 USP15Q9Y4E8 981 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms