RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 TMEM270Q6UE05 265 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 CATSPERGQ6ZRH7 1159 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 SAMD7Q7Z3H4 446 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 CCDC50Q8IVM0 306 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 ANKS4BQ8N8V4 417 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 DEPTORQ8TB45 409 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 FEZF2Q8TBJ5 459 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 TEX13BQ9BXU2 312 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 NIFKQ9BYG3 293 aaKnown RBP9.5□□□□□ -0.89
NCBP3-204ENST00000574911 NUB1Q9Y5A7 615 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 KIAA1217Q5T5P2 1943 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 K7ERI5 159 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 TLR3O15455 904 aaKnown RBP9.5□□□□□ -0.89
NCBP3-204ENST00000574911 THAP12O43422 761 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 OAS1P00973 400 aaKnown RBP9.5□□□□□ -0.89
NCBP3-204ENST00000574911 VIMP08670 466 aaKnown RBP9.5□□□□□ -0.89
NCBP3-204ENST00000574911 CREB1P16220 341 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 KLRC2P26717 231 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 IFNAR2P48551 515 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 CCDC89Q8N998 374 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 OR5B17Q8NGF7 314 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 ZNF526Q8TF50 670 aaPredicted RBP9.5□□□□□ -0.89
NCBP3-204ENST00000574911 FAM212AQ96EL1 285 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 PWWP2AQ96N64 755 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 ELAC2Q9BQ52 826 aaKnown RBP9.5□□□□□ -0.89
NCBP3-204ENST00000574911 MSTO1Q9BUK6 570 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 TARS2Q9BW92 718 aaKnown RBP9.5□□□□□ -0.89
NCBP3-204ENST00000574911 NSRP1Q9H0G5 558 aaKnown RBP9.5□□□□□ -0.89
NCBP3-204ENST00000574911 TMEM134Q9H6X4 195 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 PICK1Q9NRD5 415 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 SAMD15Q9P1V8 674 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 PIM2Q9P1W9 311 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 LGALS13Q9UHV8 139 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 IGKV6D-21A0A0A0MT36 114 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 TMEM120BA0PK00 339 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 C19orf81C9J6K1 198 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 GSTA1P08263 222 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 SSTR3P32745 418 aaPredicted RBP9.49□□□□□ -0.89
NCBP3-204ENST00000574911 NOP14P78316 857 aaKnown RBP9.49□□□□□ -0.89
NCBP3-204ENST00000574911 IZUMO3Q5VZ72 239 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 HIBCHQ6NVY1 386 aaPredicted RBP9.49□□□□□ -0.89
NCBP3-204ENST00000574911 MICALL2Q8IY33 904 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 FUKQ8N0W3 1084 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 PARVAQ9NVD7 372 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 DNAJC17Q9NVM6 304 aaKnown RBP9.49□□□□□ -0.89
NCBP3-204ENST00000574911 HAUS2Q9NVX0 235 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.49□□□□□ -0.89
NCBP3-204ENST00000574911 CTNNAL1Q9UBT7 734 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 FBXO40Q9UH90 709 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 IP6K2Q9UHH9 426 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 USTQ9Y2C2 406 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 LOC285556D6RIA3 1793 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 LRRIQ4A6NIV6 560 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 SNX3O60493 162 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 GJB6O95452 261 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 CETPP11597 493 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 CD58P19256 250 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 GMPSP49915 693 aaPredicted RBP9.49□□□□□ -0.89
NCBP3-204ENST00000574911 MNAT1P51948 309 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 ZNF365Q70YC5 407 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 WRNIP1Q96S55 665 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 FAM118BQ9BPY3 351 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 FOXP3Q9BZS1 431 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 SLC12A4Q9UP95 1085 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 LCTP09848 1927 aa9.49□□□□□ -0.89
NCBP3-204ENST00000574911 TCRBV5S1A1TA0A578 114 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 TMEM191CA6NGB0 347 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 ATP2C2O75185 946 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 TMEM191BP0C7N4 346 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 MMP8P22894 467 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 VPS41P49754 854 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 TGFB2P61812 414 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 NFX1Q12986 1120 aaKnown RBP9.48□□□□□ -0.89
NCBP3-204ENST00000574911 NCOA4Q13772 614 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 LRRC14Q15048 493 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 TARBP2Q15633 366 aaKnown RBP9.48□□□□□ -0.89
NCBP3-204ENST00000574911 STXBP2Q15833 593 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 SCARA3Q6AZY7 606 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 CYB5D1Q6P9G0 228 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 RCOR2Q8IZ40 523 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 CYP4X1Q8N118 509 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 CKAP2Q8WWK9 683 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 ZNF606Q8WXB4 792 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 EURLQ9NYK6 297 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 ANKFY1Q9P2R3 1169 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 SPDYE16A6NNV3 312 aaPredicted RBP9.48□□□□□ -0.89
NCBP3-204ENST00000574911 TCP11X1B4DZS4 312 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 NFKBIEO00221 500 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 LIASO43766 372 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 ADCY3O60266 1144 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 ABHD2P08910 425 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 RFC5P40937 340 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 FSTL1Q12841 308 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 GRM1Q13255 1194 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 MPP2Q14168 576 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 STAT4Q14765 748 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 DRICH1Q6PGQ1 229 aaPredicted RBP9.48□□□□□ -0.89
NCBP3-204ENST00000574911 TRPM8Q7Z2W7 1104 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 BRSK2Q8IWQ3 736 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 PARP9Q8IXQ6 854 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms