RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 HPS3Q969F9 1004 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 FUBP1Q96AE4 644 aaKnown RBP6.18□□□□□ -1.42
CDC27-216ENST00000574304 MAP3K14Q99558 947 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 IMPG2Q9BZV3 1241 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 BRD9Q9H8M2 597 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 KMT5AQ9NQR1 393 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 ABCF2Q9UG63 623 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 TESQ9UGI8 421 aaKnown RBP6.18□□□□□ -1.42
CDC27-216ENST00000574304 DMRT1Q9Y5R6 373 aa6.18□□□□□ -1.42
CDC27-216ENST00000574304 MYADML2A6NDP7 307 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 OFD1O75665 1012 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 ZFPL1O95159 310 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 HKR1P10072 659 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 PRDX5P30044 214 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 AVPR1BP47901 424 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 VAV2P52735 878 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 BLOC1S1P78537 153 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 GEN1Q17RS7 908 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 ATAT1Q5SQI0 421 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 IFIT1BQ5T764 474 aaKnown RBP6.17□□□□□ -1.42
CDC27-216ENST00000574304 GRAMD1CQ8IYS0 662 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 Q8NA96 180 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 SUPT20HQ8NEM7 779 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 COQ10AQ96MF6 247 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 CAMKK2Q96RR4 588 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 C1orf43Q9BWL3 253 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 CDH19Q9H159 772 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 WDCPQ9H6R7 721 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 LMBRD1Q9NUN5 540 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 SYBUQ9NX95 663 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 FEZ2Q9UHY8 353 aaPredicted RBP6.17□□□□□ -1.42
CDC27-216ENST00000574304 PACSIN3Q9UKS6 424 aa6.17□□□□□ -1.42
CDC27-216ENST00000574304 THRAP3Q9Y2W1 955 aaKnown RBP6.17□□□□□ -1.42
CDC27-216ENST00000574304 RHOBTB3O94955 611 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 GJB1P08034 283 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 TGM1P22735 817 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 PIK3CGP48736 1102 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 ZNF844Q08AG5 666 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 ZNF267Q14586 743 aaPredicted RBP6.16□□□□□ -1.42
CDC27-216ENST00000574304 CCDC157Q569K6 752 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 FAM90A1Q86YD7 464 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 PDSS2Q86YH6 399 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 COLGALT2Q8IYK4 626 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 PDPRQ8NCN5 879 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 LINC00476Q8WZB0 136 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 AGAP2Q99490 1192 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 SLC12A5Q9H2X9 1139 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 UNKLQ9H9P5 680 aaKnown RBP6.16□□□□□ -1.42
CDC27-216ENST00000574304 SLAMF7Q9NQ25 335 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 TBCCD1Q9NVR7 557 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 RLIMQ9NVW2 624 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 VSX1Q9NZR4 365 aaPredicted RBP6.16□□□□□ -1.42
CDC27-216ENST00000574304 ZIM2Q9NZV7 527 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 CFAP97Q9P2B7 532 aa6.16□□□□□ -1.42
CDC27-216ENST00000574304 AP1G1O43747 822 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 TYRP14679 529 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 KCNA2P16389 499 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 FDXRP22570 491 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 PROZP22891 400 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 PSMC1P62191 440 aaKnown RBP6.15□□□□□ -1.42
CDC27-216ENST00000574304 PURAQ00577 322 aaKnown RBP6.15□□□□□ -1.42
CDC27-216ENST00000574304 PIGFQ07326 219 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 CLNKQ7Z7G1 428 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 TPH2Q8IWU9 490 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 RAVER1Q8IY67 606 aaKnown RBP6.15□□□□□ -1.42
CDC27-216ENST00000574304 CFAP52Q8N1V2 620 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 SH2D3CQ8N5H7 860 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 SCAMP4Q969E2 229 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 CAVIN3Q969G5 261 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 FAM167AQ96KS9 214 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 TOR3AQ9H497 397 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 SLITRK6Q9H5Y7 841 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 CTTNBP2NLQ9P2B4 639 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 NEU2Q9Y3R4 380 aa6.15□□□□□ -1.42
CDC27-216ENST00000574304 EPN1Q9Y6I3 576 aaPredicted RBP6.15□□□□□ -1.42
CDC27-216ENST00000574304 TRGV11A0A075B6L2 103 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 CCDC195A0A1B0GUA6 201 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 A0A1W2PS29 197 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 PRSS29PA6NIE9 313 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 ZNF785A8K8V0 405 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 E9PLN8 166 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 RFPL1O75677 317 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 S100BP04271 92 aaPredicted RBP6.14□□□□□ -1.43
CDC27-216ENST00000574304 HSPA6P17066 643 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 PHKA1P46020 1223 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 ANKRD13AQ8IZ07 590 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 NSUN7Q8NE18 718 aaKnown RBP6.14□□□□□ -1.43
CDC27-216ENST00000574304 TNPO1Q92973 898 aaKnown RBP6.14□□□□□ -1.43
CDC27-216ENST00000574304 TMEM125Q96AQ2 219 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 C1GALT1C1Q96EU7 318 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 PTCD3Q96EY7 689 aaKnown RBP6.14□□□□□ -1.43
CDC27-216ENST00000574304 LRGUKQ96M69 825 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 Q96MF0 132 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 AIFM3Q96NN9 605 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 VKORC1Q9BQB6 163 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 MRPL46Q9H2W6 279 aaKnown RBP6.14□□□□□ -1.43
CDC27-216ENST00000574304 NMRK2Q9NPI5 230 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 CASS4Q9NQ75 786 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 PNPOQ9NVS9 261 aa6.14□□□□□ -1.43
CDC27-216ENST00000574304 NR2E3Q9Y5X4 410 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms