RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ZFP37Q9Y6Q3 630 aaPredicted RBP18.92■□□□□ 0.62
SMG6-214ENST00000573827 F5P12259 2224 aa18.92■□□□□ 0.62
SMG6-214ENST00000573827 CFAP54Q96N23 3096 aa18.92■□□□□ 0.62
SMG6-214ENST00000573827 F13A1P00488 732 aa18.91■□□□□ 0.62
SMG6-214ENST00000573827 FOXD4L5Q5VV16 416 aaPredicted RBP18.91■□□□□ 0.62
SMG6-214ENST00000573827 ZNF280DQ6N043 979 aa18.91■□□□□ 0.62
SMG6-214ENST00000573827 CNNM4Q6P4Q7 775 aa18.91■□□□□ 0.62
SMG6-214ENST00000573827 NPAS3Q8IXF0 933 aa18.91■□□□□ 0.62
SMG6-214ENST00000573827 ST13P5Q8NFI4 369 aaPredicted RBP18.91■□□□□ 0.62
SMG6-214ENST00000573827 FOXD4L4Q8WXT5 416 aaPredicted RBP18.91■□□□□ 0.62
SMG6-214ENST00000573827 BORCS6Q96GS4 357 aa18.91■□□□□ 0.62
SMG6-214ENST00000573827 TNMDQ9H2S6 317 aa18.91■□□□□ 0.62
SMG6-214ENST00000573827 CRISPLD1Q9H336 500 aa18.91■□□□□ 0.62
SMG6-214ENST00000573827 AFF4Q9UHB7 1163 aaKnown RBP18.91■□□□□ 0.62
SMG6-214ENST00000573827 INSL5Q9Y5Q6 135 aa18.91■□□□□ 0.62
SMG6-214ENST00000573827 NUMBLQ9Y6R0 609 aa18.91■□□□□ 0.62
SMG6-214ENST00000573827 TSC2P49815 1807 aa18.9■□□□□ 0.62
SMG6-214ENST00000573827 KRBA1A5PL33 1030 aa18.9■□□□□ 0.62
SMG6-214ENST00000573827 CUTAO60888 179 aa18.9■□□□□ 0.62
SMG6-214ENST00000573827 TYMPP19971 482 aa18.9■□□□□ 0.62
SMG6-214ENST00000573827 HOXD13P35453 343 aa18.9■□□□□ 0.62
SMG6-214ENST00000573827 TMEM132DQ14C87 1099 aa18.9■□□□□ 0.62
SMG6-214ENST00000573827 PABPC1LQ4VXU2 614 aaKnown RBP18.9■□□□□ 0.62
SMG6-214ENST00000573827 PRSS36Q5K4E3 855 aa18.9■□□□□ 0.62
SMG6-214ENST00000573827 PARM1Q6UWI2 310 aa18.9■□□□□ 0.62
SMG6-214ENST00000573827 CXorf38Q8TB03 319 aa18.9■□□□□ 0.62
SMG6-214ENST00000573827 ACCSQ96QU6 501 aa18.9■□□□□ 0.62
SMG6-214ENST00000573827 TRIM9Q9C026 710 aa18.9■□□□□ 0.62
SMG6-214ENST00000573827 PANK4Q9NVE7 773 aa18.9■□□□□ 0.62
SMG6-214ENST00000573827 GVINP1Q7Z2Y8 2422 aa18.9■□□□□ 0.62
SMG6-214ENST00000573827 XPOTO43592 962 aaKnown RBP18.89■□□□□ 0.61
SMG6-214ENST00000573827 RHOP08100 348 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 SRFP11831 508 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 PDIA4P13667 645 aaKnown RBP18.89■□□□□ 0.61
SMG6-214ENST00000573827 IDEP14735 1019 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 CCR2P41597 374 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 ARPP19P56211 112 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 EHHADHQ08426 723 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 SCARA3Q6AZY7 606 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 ASTLQ6HA08 431 aaPredicted RBP18.89■□□□□ 0.61
SMG6-214ENST00000573827 RNF19BQ6ZMZ0 732 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 POMGNT1Q8WZA1 660 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 HPS3Q969F9 1004 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 FAM212AQ96EL1 285 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 SENP8Q96LD8 212 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 RTP3Q9BQQ7 232 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 CBWD1Q9BRT8 395 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 CYP4F11Q9HBI6 524 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 SLC2A4RGQ9NR83 387 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 CEP72Q9P209 647 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 WNT16Q9UBV4 365 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 MAFFQ9ULX9 164 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 POLIQ9UNA4 740 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 FRYLO94915 3013 aa18.89■□□□□ 0.61
SMG6-214ENST00000573827 ZNF292O60281 2723 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 PI15O43692 258 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 MOSPD3O75425 235 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 GCNT3O95395 438 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 CYP11A1P05108 521 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 OR4Q2P0C623 313 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 GARTP22102 1010 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 CLCN5P51795 746 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 NUBP1P53384 320 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 YWHAHQ04917 246 aaPredicted RBP18.88■□□□□ 0.61
SMG6-214ENST00000573827 ADCY1Q08828 1119 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 ALCAMQ13740 583 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 POSTNQ15063 836 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 EPM2AIP1Q7L775 607 aaPredicted RBP18.88■□□□□ 0.61
SMG6-214ENST00000573827 BRSK2Q8IWQ3 736 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 PHOX2BQ99453 314 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 PRRX2Q99811 253 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 CUEDC2Q9H467 287 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 PCDHA7Q9UN72 937 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 ZDHHC9Q9Y397 364 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 PCDHB13Q9Y5F0 798 aa18.88■□□□□ 0.61
SMG6-214ENST00000573827 PTPRZ1P23471 2315 aaPredicted RBP18.88■□□□□ 0.61
SMG6-214ENST00000573827 OR6C75A6NL08 312 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 PRRG1O14668 218 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 PRPF6O94906 941 aaKnown RBP18.87■□□□□ 0.61
SMG6-214ENST00000573827 CEBPBP17676 345 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 PAX3P23760 479 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 EPHA5P54756 1037 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 PTPN5P54829 565 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 GPR17Q13304 367 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 FOXD4L6Q3SYB3 417 aaPredicted RBP18.87■□□□□ 0.61
SMG6-214ENST00000573827 FOXD4L3Q6VB84 417 aaPredicted RBP18.87■□□□□ 0.61
SMG6-214ENST00000573827 SIX5Q8N196 739 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 OR10T2Q8NGX3 314 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 GPR152Q8TDT2 470 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 DHX58Q96C10 678 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 TCEAL4Q96EI5 215 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 SAAL1Q96ER3 474 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 FAM84AQ96KN4 292 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 TMEM209Q96SK2 561 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 LRRC3Q9BY71 257 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 OXCT2Q9BYC2 517 aaPredicted RBP18.87■□□□□ 0.61
SMG6-214ENST00000573827 DPP3Q9NY33 737 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 RCOR1Q9UKL0 485 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 EXOC7Q9UPT5 735 aa18.87■□□□□ 0.61
SMG6-214ENST00000573827 FAM186AA6NE01 2351 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms