RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 DSG1Q02413 1049 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 PSMD5Q16401 504 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 UPP1Q16831 310 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 KNOP1Q1ED39 458 aaKnown RBP8.43□□□□□ -1.06
SMG6-211ENST00000572369 PDXDC1Q6P996 788 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 PRSS55Q6UWB4 352 aaPredicted RBP8.43□□□□□ -1.06
SMG6-211ENST00000572369 DSTYKQ6XUX3 929 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 EPM2AIP1Q7L775 607 aaPredicted RBP8.43□□□□□ -1.06
SMG6-211ENST00000572369 RDH13Q8NBN7 331 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 CACTINQ8WUQ7 758 aaKnown RBP8.43□□□□□ -1.06
SMG6-211ENST00000572369 RIPOR3Q96MK2 946 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 KLHL5Q96PQ7 755 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 CBWD1Q9BRT8 395 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 TTPALQ9BTX7 342 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 APOL5Q9BWW9 433 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 SEMA4AQ9H3S1 761 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMG6-211ENST00000572369 RMND1Q9NWS8 449 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 RBAKQ9NYW8 714 aaPredicted RBP8.43□□□□□ -1.06
SMG6-211ENST00000572369 DPP7Q9UHL4 492 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 HCFC2Q9Y5Z7 792 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 IRAK3Q9Y616 596 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 MYO7AQ13402 2215 aa8.43□□□□□ -1.06
SMG6-211ENST00000572369 TMEM189-UBE2V1I3L0A0 370 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 I3L4J1 428 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 FAM189A1O60320 539 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 EXOC3O60645 756 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 TBX10O75333 385 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 CLSTN1O94985 981 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 GLUD1P00367 558 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 NFICP08651 508 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 TMEM191BP0C7N4 346 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 EPCAMP16422 314 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 RPL17P18621 184 aaKnown RBP8.42□□□□□ -1.06
SMG6-211ENST00000572369 CYP3A5P20815 502 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 TKTP29401 623 aaKnown RBP8.42□□□□□ -1.06
SMG6-211ENST00000572369 LTBRP36941 435 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 GUCY2FP51841 1108 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 SNRPFP62306 86 aaKnown RBP8.42□□□□□ -1.06
SMG6-211ENST00000572369 RBM10P98175 930 aaKnown RBP8.42□□□□□ -1.06
SMG6-211ENST00000572369 TFAMQ00059 246 aaKnown RBP8.42□□□□□ -1.06
SMG6-211ENST00000572369 DLX2Q07687 328 aaPredicted RBP8.42□□□□□ -1.06
SMG6-211ENST00000572369 EHHADHQ08426 723 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 DPYDQ12882 1025 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 STK4Q13043 487 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 SMAD4Q13485 552 aaKnown RBP8.42□□□□□ -1.06
SMG6-211ENST00000572369 PNOCQ13519 176 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 SURF1Q15526 300 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 CTC1Q2NKJ3 1217 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 CES5AQ6NT32 575 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 ANKRD54Q6NXT1 300 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.42□□□□□ -1.06
SMG6-211ENST00000572369 PALB2Q86YC2 1186 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 FMR1NBQ8N0W7 255 aaPredicted RBP8.42□□□□□ -1.06
SMG6-211ENST00000572369 C3orf58Q8NDZ4 430 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 ZSWIM2Q8NEG5 633 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 GOLGA5Q8TBA6 731 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 SCFD1Q8WVM8 642 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 SMARCE1Q969G3 411 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 IPO9Q96P70 1041 aaKnown RBP8.42□□□□□ -1.06
SMG6-211ENST00000572369 KIAA1586Q9HCI6 787 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 AGPAT3Q9NRZ7 376 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 CHST7Q9NS84 486 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 DPP3Q9NY33 737 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 HSPBP1Q9NZL4 362 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 CGNQ9P2M7 1197 aaKnown RBP8.42□□□□□ -1.06
SMG6-211ENST00000572369 MAPK8IP1Q9UQF2 711 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 DERAQ9Y315 318 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 VWA8A3KMH1 1905 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 CEP295Q9C0D2 2601 aa8.42□□□□□ -1.06
SMG6-211ENST00000572369 MTCL1Q9Y4B5 1905 aaKnown RBP8.41□□□□□ -1.06
SMG6-211ENST00000572369 LOC730098B7Z3J9 87 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 H7C4K7 107 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 TEX28O15482 410 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 MEFVO15553 781 aaPredicted RBP8.41□□□□□ -1.06
SMG6-211ENST00000572369 TGFB1I1O43294 461 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 CALUO43852 315 aaPredicted RBP8.41□□□□□ -1.06
SMG6-211ENST00000572369 GADD45BO75293 160 aaPredicted RBP8.41□□□□□ -1.06
SMG6-211ENST00000572369 PRPF40AO75400 957 aaKnown RBP8.41□□□□□ -1.06
SMG6-211ENST00000572369 RHOBTB3O94955 611 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 GLP2RO95838 553 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 TNNC2P02585 160 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 ADRB2P07550 413 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 KRT19P08727 400 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 SPATA31D3P0C874 917 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 HOXB8P17481 243 aaPredicted RBP8.41□□□□□ -1.06
SMG6-211ENST00000572369 LRPAP1P30533 357 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 CLCN4P51793 760 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 ARPP19P56211 112 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 POU5F1Q01860 360 aaKnown RBP8.41□□□□□ -1.06
SMG6-211ENST00000572369 SNW1Q13573 536 aaKnown RBP8.41□□□□□ -1.06
SMG6-211ENST00000572369 KCNB1Q14721 858 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 CBX2Q14781 532 aaPredicted RBP8.41□□□□□ -1.06
SMG6-211ENST00000572369 ZBTB6Q15916 424 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 SNRNP35Q16560 246 aaKnown RBP8.41□□□□□ -1.06
SMG6-211ENST00000572369 BMT2Q1RMZ1 405 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 RTP2Q5QGT7 225 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 RARS2Q5T160 578 aaKnown RBP8.41□□□□□ -1.06
SMG6-211ENST00000572369 SPATA1Q5VX52 437 aa8.41□□□□□ -1.06
SMG6-211ENST00000572369 CRELD2Q6UXH1 353 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms