RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	RBSN	Q9H1K0	784 aa		12.91	□□□□□ -0.34
FANCA-231	ENST00000568626	VPS16	Q9H269	839 aa		12.91	□□□□□ -0.34
FANCA-231	ENST00000568626	NKX2-4	Q9H2Z4	354 aa		12.91	□□□□□ -0.34
FANCA-231	ENST00000568626	LZTS1	Q9Y250	596 aa		12.91	□□□□□ -0.34
FANCA-231	ENST00000568626		A0A1B0GTH6	734 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	KPNA7	A9QM74	516 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	PPEF2	O14830	753 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	SYN3	O14994	580 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	CBFA2T2	O43439	604 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	ODC1	P11926	461 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	RFX1	P22670	979 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	PBX3	P40426	434 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	MYL6	P60660	151 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	TNNC1	P63316	161 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	NOP14	P78316	857 aa	Known RBP	12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	EXOC3L4	Q17RC7	722 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	ZNF667	Q5HYK9	610 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	SMYD5	Q6GMV2	418 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	FUT10	Q6P4F1	479 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	SARM1	Q6SZW1	724 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	SPATA18	Q8TC71	538 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	SUSD3	Q96L08	255 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	NT5C1B	Q96P26	610 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	XYLT2	Q9H1B5	865 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	FAM124B	Q9H5Z6	455 aa	Predicted RBP	12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	GDAP2	Q9NXN4	497 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	CACNG4	Q9UBN1	327 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	DSE	Q9UL01	958 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626	DAAM1	Q9Y4D1	1078 aa		12.9	□□□□□ -0.34
FANCA-231	ENST00000568626		M0QZQ0	153 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	FGF18	O76093	207 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	CST3	P01034	146 aa	Predicted RBP	12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	ITGB1	P05556	798 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	UBASH3A	P57075	661 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	UBXN1	Q04323	297 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	PDXDC1	Q6P996	788 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	TRIM65	Q6PJ69	517 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	DSTYK	Q6XUX3	929 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	DPH6	Q7L8W6	267 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	DDX53	Q86TM3	631 aa	Known RBP	12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	TMEM173	Q86WV6	379 aa	Predicted RBP	12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	GPR65	Q8IYL9	337 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	RNF168	Q8IYW5	571 aa	Predicted RBP	12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	TTC39C	Q8N584	583 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	DEFB123	Q8N688	67 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	TOP6BL	Q8N6T0	577 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	KLHL23	Q8NBE8	558 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	EHBP1	Q8NDI1	1231 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	APPL2	Q8NEU8	664 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	FBXO22	Q8NEZ5	403 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	ERGIC2	Q96RQ1	377 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	C17orf80	Q9BSJ5	609 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	HERC2P3	Q9BVR0	1158 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	NIF3L1	Q9GZT8	377 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	INTS2	Q9H0H0	1204 aa	Known RBP	12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	LMAN2L	Q9H0V9	348 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	RTN4	Q9NQC3	1192 aa	Known RBP	12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	PUF60	Q9UHX1	559 aa	Known RBP	12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	PCDHB8	Q9UN66	801 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	TSC2	P49815	1807 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626	SCN1A	P35498	2009 aa		12.89	□□□□□ -0.35
FANCA-231	ENST00000568626		A0A1W2PQC6	194 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	NT5C1B-RDH14	C9J2C7	533 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	DLL1	O00548	723 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	HUS1	O60921	280 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	ARHGEF15	O94989	841 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	EFEMP2	O95967	443 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	SOD2	P04179	222 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	FAM163B	P0C2L3	166 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	TYMP	P19971	482 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	TBXAS1	P24557	533 aa	Predicted RBP	12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	BMS1	Q14692	1282 aa	Known RBP	12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	USP41	Q3LFD5	358 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	WDR72	Q3MJ13	1102 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	TIGD5	Q53EQ6	642 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	CD300LG	Q6UXG3	332 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	ENOSF1	Q7L5Y1	443 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	TMEM86A	Q8N2M4	240 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	HASPIN	Q8TF76	798 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	RABGGTA	Q92696	567 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	SEMA4D	Q92854	862 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	SENP8	Q96LD8	212 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	OXCT2	Q9BYC2	517 aa	Predicted RBP	12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	CYP3A43	Q9HB55	503 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	APEX2	Q9UBZ4	518 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	MTUS1	Q9ULD2	1270 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	SSX2IP	Q9Y2D8	614 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	SNX9	Q9Y5X1	595 aa		12.88	□□□□□ -0.35
FANCA-231	ENST00000568626	LAMA2	P24043	3122 aa	Known RBP	12.87	□□□□□ -0.35
FANCA-231	ENST00000568626	PLXNA4	Q9HCM2	1894 aa		12.87	□□□□□ -0.35
FANCA-231	ENST00000568626	COL4A4	P53420	1690 aa	Predicted RBP	12.87	□□□□□ -0.35
FANCA-231	ENST00000568626		F8W810	466 aa		12.87	□□□□□ -0.35
FANCA-231	ENST00000568626		H3BNC9	293 aa		12.87	□□□□□ -0.35
FANCA-231	ENST00000568626	CYB561D2	O14569	222 aa		12.87	□□□□□ -0.35
FANCA-231	ENST00000568626	SPTLC1	O15269	473 aa		12.87	□□□□□ -0.35
FANCA-231	ENST00000568626	CYP11A1	P05108	521 aa		12.87	□□□□□ -0.35
FANCA-231	ENST00000568626	UROD	P06132	367 aa		12.87	□□□□□ -0.35
FANCA-231	ENST00000568626	FGFR3	P22607	806 aa		12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms