RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 AGAP1Q9UPQ3 857 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 ATP11BQ9Y2G3 1177 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 NPIPB8E9PQR5 432 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 RNASET2O00584 256 aaKnown RBP4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 ERC2O15083 957 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 LPXNO60711 386 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 HDCP19113 662 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 PHKA1P46020 1223 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 HSD11B2P80365 405 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 SCAPQ12770 1279 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 GFOD2Q3B7J2 385 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 LSM12Q3MHD2 195 aaKnown RBP4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 ARHGAP29Q52LW3 1261 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 EMC10Q5UCC4 262 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 Q6ZPA2 131 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 CHST15Q7LFX5 561 aaPredicted RBP4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 PDSS2Q86YH6 399 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 TMEM132CQ8N3T6 1108 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 MYEOVQ96EZ4 313 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 MLST8Q9BVC4 326 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 B3GNT5Q9BYG0 378 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 GPR35Q9HC97 309 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 C1orf112Q9NSG2 853 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 STAP2Q9UGK3 403 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 L1RE1Q9UN81 338 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 FZD1Q9UP38 647 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 FPGT-TNNI3KV9GXZ4 949 aa4.97□□□□□ -1.61
HERPUD1-212ENST00000567944 CENPVL1A0A0U1RR11 272 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 MARCH6O60337 910 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 NDUFA10O95299 355 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 ATF3P18847 181 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 BMPR1AP36894 532 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 EXOSC9Q06265 439 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 TCF15Q12870 199 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 LLGL1Q15334 1064 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 ANO6Q4KMQ2 910 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 CRB2Q5IJ48 1285 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 TMPRSS9Q7Z410 1059 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 PDPRQ8NCN5 879 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 TNPO1Q92973 898 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 TIFAQ96CG3 184 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 C8orf48Q96LL4 319 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 RNPEPQ9H4A4 650 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 BRD9Q9H8M2 597 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 ZMAT3Q9HA38 289 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 RLIMQ9NVW2 624 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 CTTNBP2NLQ9P2B4 639 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 FEZ2Q9UHY8 353 aaPredicted RBP4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 ZDHHC8Q9ULC8 765 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 PCDHA6Q9UN73 950 aa4.96□□□□□ -1.62
HERPUD1-212ENST00000567944 ANXA1P04083 346 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 RARBP10826 455 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 NPR1P16066 1061 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 LAG3P18627 525 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 TACR2P21452 398 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 TOB1P50616 345 aaPredicted RBP4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 PSMC1P62191 440 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 RESTQ13127 1097 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 FGL2Q14314 439 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 CYP2A13Q16696 494 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 PPP1R32Q7Z5V6 425 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 CFAP52Q8N1V2 620 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 SLC17A8Q8NDX2 589 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 NSUN7Q8NE18 718 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 CPEB3Q8NE35 698 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 SCAMP4Q969E2 229 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 FUBP1Q96AE4 644 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 PNKPQ96T60 521 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 IMPG2Q9BZV3 1241 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 NRDE2Q9H7Z3 1164 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 MMRN2Q9H8L6 949 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 SLAMF7Q9NQ25 335 aa4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.95□□□□□ -1.62
HERPUD1-212ENST00000567944 GOLGA6CA6NDK9 693 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 GOLGA6BA6NDN3 693 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 ZNF785A8K8V0 405 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 DNAJB5O75953 348 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 SUN1O94901 812 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 SPDEFO95238 335 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 GPANK1O95872 356 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 HRGP04196 525 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 GOLGA6DP0CG33 693 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 C6P13671 934 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 FDXRP22570 491 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 ZNF135P52742 658 aaPredicted RBP4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 ARFIP2P53365 341 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 CXADRP78310 365 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 HABP2Q14520 560 aaPredicted RBP4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 CCDC157Q569K6 752 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 KHDC1LQ5JSQ8 128 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 DAAM2Q86T65 1068 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 HAS1Q92839 578 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 ZNF341Q9BYN7 854 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 C22orf23Q9BZE7 217 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 REXO4Q9GZR2 422 aaKnown RBP4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 BHMT2Q9H2M3 363 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 RSAD1Q9HA92 442 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 TMEM74BQ9NUR3 256 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 GNL3LQ9NVN8 582 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms