RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 SQSTM1Q13501 440 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 GRAPQ13588 217 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 TRIM29Q14134 588 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 SART3Q15020 963 aaKnown RBP5.98□□□□□ -1.45
CAPN3-217ENST00000567817 STK38Q15208 465 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 SKIDA1Q1XH10 827 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 ANO6Q4KMQ2 910 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 FNDC3BQ53EP0 1204 aaKnown RBP5.98□□□□□ -1.45
CAPN3-217ENST00000567817 UBXN11Q5T124 520 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 BORAQ6PGQ7 559 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 HHIPL2Q6UWX4 724 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 SGMS1Q86VZ5 419 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 PLA2G4DQ86XP0 818 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 PTRH1Q86Y79 214 aaKnown RBP5.98□□□□□ -1.45
CAPN3-217ENST00000567817 CCAR1Q8IX12 1150 aaKnown RBP5.98□□□□□ -1.45
CAPN3-217ENST00000567817 GRAPLQ8TC17 118 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-217ENST00000567817 LCORQ96JN0 433 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-217ENST00000567817 PGBD1Q96JS3 809 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 CDC5LQ99459 802 aaKnown RBP5.98□□□□□ -1.45
CAPN3-217ENST00000567817 TRIM5Q9C035 493 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 KRT23Q9C075 422 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 SMURF1Q9HCE7 757 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 RIC8BQ9NVN3 520 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 TMEM260Q9NX78 707 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 FTSJ1Q9UET6 329 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 PAXBP1Q9Y5B6 917 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 MORC2Q9Y6X9 1032 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-217ENST00000567817 LRRC37AA6NMS7 1700 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 POLR2AP24928 1970 aaKnown RBP5.97□□□□□ -1.45
CAPN3-217ENST00000567817 BRCA2P51587 3418 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 KLF18A0A0U1RQI7 1052 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 FAM237AA0A1B0GTK4 181 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 FAM90A27PA6NNH2 459 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 SMTNL1A8MU46 457 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 WDHD1O75717 1129 aaPredicted RBP5.97□□□□□ -1.45
CAPN3-217ENST00000567817 FBXO21O94952 628 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 CYP1A1P04798 512 aaPredicted RBP5.97□□□□□ -1.45
CAPN3-217ENST00000567817 COL6A1P12109 1028 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 CMA1P23946 247 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 CNR2P34972 360 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 METAP2P50579 478 aaKnown RBP eCLIP5.97□□□□□ -1.45
CAPN3-217ENST00000567817 ZNF75DP51815 510 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 PFKPQ01813 784 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 DBPQ10586 325 aaPredicted RBP5.97□□□□□ -1.45
CAPN3-217ENST00000567817 SAFBQ15424 915 aaKnown RBP eCLIP5.97□□□□□ -1.45
CAPN3-217ENST00000567817 SYCP1Q15431 976 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 SMAD2Q15796 467 aaKnown RBP5.97□□□□□ -1.45
CAPN3-217ENST00000567817 HLFQ16534 295 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 CCDC152Q4G0S7 254 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 SLC9C2Q5TAH2 1124 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 TRMT10BQ6PF06 316 aaKnown RBP5.97□□□□□ -1.45
CAPN3-217ENST00000567817 FGD2Q7Z6J4 655 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 DRC7Q8IY82 874 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 ZNF34Q8IZ26 560 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 LGI4Q8N135 537 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 CISD2Q8N5K1 135 aaKnown RBP5.97□□□□□ -1.45
CAPN3-217ENST00000567817 VGLL2Q8N8G2 317 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 FSIP1Q8NA03 581 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 LINC00301Q8NCQ3 95 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 ENGASEQ8NFI3 743 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 IGDCC4Q8TDY8 1250 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 USP28Q96RU2 1077 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 TMEM168Q9H0V1 697 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 KCND1Q9NSA2 647 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 ARHGAP20Q9P2F6 1191 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 ORC3Q9UBD5 711 aaPredicted RBP5.97□□□□□ -1.45
CAPN3-217ENST00000567817 TRMT112Q9UI30 125 aaKnown RBP5.97□□□□□ -1.45
CAPN3-217ENST00000567817 ZFP69BQ9UJL9 534 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 COQ6Q9Y2Z9 468 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 ANKRD36CQ5JPF3 1778 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 ZNF646O15015 1829 aaPredicted RBP5.97□□□□□ -1.45
CAPN3-217ENST00000567817 DUOX1Q9NRD9 1551 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 NCANO14594 1321 aa5.97□□□□□ -1.45
CAPN3-217ENST00000567817 SHTN1A0MZ66 631 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 ERICH2A1L162 156 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 B8ZZF3 427 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 UBE2Q2LH0YL09 131 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 SH2B2O14492 632 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-217ENST00000567817 SPTLC2O15270 562 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 ZBTB43O43298 467 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 PRICKLE3O43900 615 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-217ENST00000567817 ECE2O60344 883 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 BMP15O95972 392 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 XBP1P17861 261 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 FGFR2P21802 821 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 IGHMBP2P38935 993 aaKnown RBP5.96□□□□□ -1.46
CAPN3-217ENST00000567817 HERVK_113P62684 666 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 CCT2P78371 535 aaKnown RBP5.96□□□□□ -1.46
CAPN3-217ENST00000567817 CAMK4Q16566 473 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 LRIT3Q3SXY7 679 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 CT47A1Q5JQC4 288 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-217ENST00000567817 ANO1Q5XXA6 986 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 FAM173BQ6P4H8 233 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 DLK2Q6UY11 383 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 LUZP1Q86V48 1076 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 APOBEC3FQ8IUX4 373 aaKnown RBP5.96□□□□□ -1.46
CAPN3-217ENST00000567817 DEFB123Q8N688 67 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 SPATA5Q8NB90 893 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 CCDC150Q8NCX0 1101 aa5.96□□□□□ -1.46
CAPN3-217ENST00000567817 DDX1Q92499 740 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms