RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 FSHRP23945 695 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 ELF1P32519 619 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 RPL9P32969 192 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 CASP5P51878 434 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 ROR1Q01973 937 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 TMEM132DQ14C87 1099 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 KYAT1Q16773 422 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 XKR4Q5GH76 650 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 ZNF280DQ6N043 979 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 BEST2Q8NFU1 509 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 CMASQ8NFW8 434 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 RSAD2Q8WXG1 361 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 HPS3Q969F9 1004 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 CHAMP1Q96JM3 812 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 MFSD14AQ96MC6 490 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 ACCSQ96QU6 501 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 MYADMQ96S97 322 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 FGFBP2Q9BYJ0 223 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 WDR6Q9NNW5 1121 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 HCFC1R1Q9NWW0 138 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 ZDHHC7Q9NXF8 308 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 AGO2Q9UKV8 859 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 EXOC7Q9UPT5 735 aa10.98□□□□□ -0.65
GTF3C1-206ENST00000566779 A0A0B4J269 797 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 TTC26A0AVF1 554 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 H7C4K7 107 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 CUTAO60888 179 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 N4BP1O75113 896 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 PRPF6O94906 941 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 CLSTN1O94985 981 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 YEATS4O95619 227 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 PIGRP01833 764 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 LRG1P02750 347 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 ABCD1P33897 745 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 GTF2BQ00403 316 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 DNM1Q05193 864 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 KCNA1Q09470 495 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 TMEM259Q4ZIN3 620 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 LILRA6Q6PI73 481 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 USP37Q86T82 979 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 CCDC65Q8IXS2 484 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 ZDHHC14Q8IZN3 488 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 APPL2Q8NEU8 664 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 FLCNQ8NFG4 579 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 DNAJC19Q96DA6 116 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 FAM84AQ96KN4 292 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 PGLYRP2Q96PD5 576 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 FIZ1Q96SL8 496 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 FAM213AQ9BRX8 229 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 BLZF1Q9H2G9 400 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 PCIF1Q9H4Z3 704 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 PLEKHA5Q9HAU0 1116 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 CYP4F11Q9HBI6 524 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 FAM13BQ9NYF5 915 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 FBXL5Q9UKA1 691 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 CPSF3Q9UKF6 684 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 USTQ9Y2C2 406 aa10.97□□□□□ -0.65
GTF3C1-206ENST00000566779 WDR27A2RRH5 827 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 SYN3O14994 580 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 NARSO43776 548 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 FAM189A1O60320 539 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 PPP6R2O75170 966 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 CFHP08603 1231 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 OR4Q2P0C623 313 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 SCP2P22307 547 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 CASP1P29466 404 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 AFMP43652 599 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 VCPP55072 806 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 TFAMQ00059 246 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 YWHAHQ04917 246 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 RAB33AQ14088 237 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 PROX2Q3B8N5 592 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 PABPC1LQ4VXU2 614 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 L1TD1Q5T7N2 865 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 SLFN12LQ6IEE8 588 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 ARMCX5Q6P1M9 558 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 SHC4Q6S5L8 630 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 ZNF720Q7Z2F6 126 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 GPR65Q8IYL9 337 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 GRAMD1CQ8IYS0 662 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 FBXL6Q8N531 539 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 ZSWIM2Q8NEG5 633 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 KCNG4Q8TDN1 519 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 HDAC7Q8WUI4 952 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 HVCN1Q96D96 273 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 SUSD3Q96L08 255 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 KCNK17Q96T54 332 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 KCNK12Q9HB15 430 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 SEL1LQ9UBV2 794 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 BACE2Q9Y5Z0 518 aa10.96□□□□□ -0.65
GTF3C1-206ENST00000566779 MYH10P35580 1976 aa10.96□□□□□ -0.66
GTF3C1-206ENST00000566779 TICRRQ7Z2Z1 1910 aa10.96□□□□□ -0.66
GTF3C1-206ENST00000566779 SMAPO00193 183 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 POLR2DO15514 142 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 HNRNPA1P09651 372 aaKnown RBP eCLIP10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 ODC1P11926 461 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 PLA2G5P39877 138 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 ADCY1Q08828 1119 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 TDGQ13569 410 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 STXBP4Q6ZWJ1 553 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms