RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 RECQL4O94761 1208 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 HMGCRP04035 888 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 RNASE9P60153 205 aaKnown RBP12.13□□□□□ -0.47
LINC00562-201ENST00000566385 GPC5P78333 572 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 TUBB2AQ13885 445 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 DCAF4L1Q3SXM0 396 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 NAA35Q5VZE5 725 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 SLFN11Q7Z7L1 901 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
LINC00562-201ENST00000566385 ARRDC4Q8NCT1 418 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 TFAP2BQ92481 460 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 TUBB2BQ9BVA1 445 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 CCDC94Q9BW85 323 aaPredicted RBP12.13□□□□□ -0.47
LINC00562-201ENST00000566385 SMYD3Q9H7B4 428 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 RNF216Q9NWF9 866 aaPredicted RBP12.13□□□□□ -0.47
LINC00562-201ENST00000566385 DPP3Q9NY33 737 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 CTTNBP2NLQ9P2B4 639 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 TUBGCP4Q9UGJ1 667 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 CTAGE15A4D2H0 777 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 THAP12O43422 761 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 CTAGE8P0CG41 777 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 PRLRP16471 622 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 BRD2P25440 801 aaKnown RBP12.13□□□□□ -0.47
LINC00562-201ENST00000566385 MAP2K2P36507 400 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 ACAD10Q6JQN1 1059 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 TAF2Q6P1X5 1199 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 ALKAL1Q6UXT8 129 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 CTAGE6Q86UF2 777 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 NT5DC3Q86UY8 548 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 SERINC5Q86VE9 423 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 CTAGE4Q8IX94 777 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 NME8Q8N427 588 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 SNX27Q96L92 541 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 TWNKQ96RR1 684 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 TRIM7Q9C029 511 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 TRMT13Q9NUP7 481 aaKnown RBP12.13□□□□□ -0.47
LINC00562-201ENST00000566385 C2CD2Q9Y426 696 aa12.13□□□□□ -0.47
LINC00562-201ENST00000566385 CYP1A1P04798 512 aaPredicted RBP12.12□□□□□ -0.47
LINC00562-201ENST00000566385 YY1P25490 414 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 MRPS6P82932 125 aaKnown RBP12.12□□□□□ -0.47
LINC00562-201ENST00000566385 NFX1Q12986 1120 aaKnown RBP12.12□□□□□ -0.47
LINC00562-201ENST00000566385 ZNF667Q5HYK9 610 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 FBXO38Q6PIJ6 1188 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 SMG8Q8ND04 991 aaKnown RBP12.12□□□□□ -0.47
LINC00562-201ENST00000566385 GOLGA1Q92805 767 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 HPDLQ96IR7 371 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 BCO2Q9BYV7 579 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 GOLGA2P5Q9HBQ8 144 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 ABCB6Q9NP58 842 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 DDX20Q9UHI6 824 aaKnown RBP12.12□□□□□ -0.47
LINC00562-201ENST00000566385 STXBP5LQ9Y2K9 1186 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 KIF4AO95239 1232 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 RHOXF2BP0C7M4 288 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 AFF1P51825 1210 aaKnown RBP12.12□□□□□ -0.47
LINC00562-201ENST00000566385 BPIFB4P59827 614 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 MRPS25P82663 173 aaKnown RBP12.12□□□□□ -0.47
LINC00562-201ENST00000566385 C2orf54Q08AI8 447 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 ZBTB6Q15916 424 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 PTGISQ16647 500 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 PEX26Q7Z412 305 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 WHAMMQ8TF30 809 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 ZNF653Q96CK0 615 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 HINFPQ9BQA5 517 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 RHOXF2Q9BQY4 288 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 PDCL3Q9H2J4 239 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 ANKZF1Q9H8Y5 726 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 AGO3Q9H9G7 860 aaKnown RBP12.12□□□□□ -0.47
LINC00562-201ENST00000566385 IPPQ9Y573 584 aa12.12□□□□□ -0.47
LINC00562-201ENST00000566385 KCNK3O14649 394 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 INHAP05111 366 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 TCP1P17987 556 aaKnown RBP12.11□□□□□ -0.47
LINC00562-201ENST00000566385 RRM1P23921 792 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 HOXD10P28358 340 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 NOMO3P69849 1222 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 POU5F1Q01860 360 aaKnown RBP12.11□□□□□ -0.47
LINC00562-201ENST00000566385 KYAT1Q16773 422 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 KCTD19Q17RG1 926 aaPredicted RBP12.11□□□□□ -0.47
LINC00562-201ENST00000566385 TWF2Q6IBS0 349 aaKnown RBP12.11□□□□□ -0.47
LINC00562-201ENST00000566385 ZNF677Q86XU0 584 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 MCOLN2Q8IZK6 566 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 CAGE1Q8TC20 777 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 NUP85Q9BW27 656 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 ST3GAL5Q9UNP4 418 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 RALGAPA2Q2PPJ7 1873 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 MYCP01106 439 aaPredicted RBP12.11□□□□□ -0.47
LINC00562-201ENST00000566385 IGFBP6P24592 240 aaPredicted RBP12.11□□□□□ -0.47
LINC00562-201ENST00000566385 AXLP30530 894 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 THPOP40225 353 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 ACLYP53396 1101 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 CENPCQ03188 943 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 ITGA7Q13683 1181 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 PCBP1Q15365 356 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC00562-201ENST00000566385 RPS6KA1Q15418 735 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 IFI16Q16666 785 aaKnown RBP12.11□□□□□ -0.47
LINC00562-201ENST00000566385 LHX8Q68G74 356 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 ZFP42Q96MM3 310 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 PNKPQ96T60 521 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 SENP6Q9GZR1 1112 aaPredicted RBP12.11□□□□□ -0.47
LINC00562-201ENST00000566385 CACNG4Q9UBN1 327 aa12.11□□□□□ -0.47
LINC00562-201ENST00000566385 CNOT8Q9UFF9 292 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms