RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ADH1AP07327 375 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 PRR29P0C7W0 189 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 FAM160A1Q05DH4 1040 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 SNW1Q13573 536 aaKnown RBP17.95■□□□□ 0.46
CDT1-202ENST00000562747 TMEM132DQ14C87 1099 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 RTP2Q5QGT7 225 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 SPATA1Q5VX52 437 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 HS2ST1Q7LGA3 356 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 OTOP3Q7RTS5 596 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 NT5DC4Q86YG4 428 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 BRSK2Q8IWQ3 736 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 GPD1LQ8N335 351 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 ENGASEQ8NFI3 743 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 BEST2Q8NFU1 509 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 RIN2Q8WYP3 895 aaPredicted RBP17.95■□□□□ 0.46
CDT1-202ENST00000562747 PIK3R5Q8WYR1 880 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 ACSF2Q96CM8 615 aaPredicted RBP17.95■□□□□ 0.46
CDT1-202ENST00000562747 SAAL1Q96ER3 474 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 B3GALT6Q96L58 329 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 KCNK12Q9HB15 430 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 MAN1C1Q9NR34 630 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 CGNQ9P2M7 1197 aaKnown RBP17.95■□□□□ 0.46
CDT1-202ENST00000562747 DUSP12Q9UNI6 340 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 NUB1Q9Y5A7 615 aa17.95■□□□□ 0.46
CDT1-202ENST00000562747 TEX28O15482 410 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 TGFB1I1O43294 461 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 RHOBTB3O94955 611 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 NFICP08651 508 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 AOC1P19801 751 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 FGFR3P22607 806 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 IGFBP6P24592 240 aaPredicted RBP17.94■□□□□ 0.46
CDT1-202ENST00000562747 STK4Q13043 487 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 TDGQ13569 410 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 KNOP1Q1ED39 458 aaKnown RBP17.94■□□□□ 0.46
CDT1-202ENST00000562747 CEP57Q86XR8 500 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 NELFCDQ8IXH7 590 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 SIX5Q8N196 739 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 KIAA0895Q8NCT3 520 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 RSAD2Q8WXG1 361 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 TIGD1Q96MW7 591 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 PCIF1Q9H4Z3 704 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 KIAA1586Q9HCI6 787 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 AGPAT3Q9NRZ7 376 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 RIF1Q5UIP0 2472 aaKnown RBP17.94■□□□□ 0.46
CDT1-202ENST00000562747 DOCK8Q8NF50 2099 aa17.94■□□□□ 0.46
CDT1-202ENST00000562747 FAM186AA6NE01 2351 aa17.93■□□□□ 0.46
CDT1-202ENST00000562747 SYN3O14994 580 aa17.93■□□□□ 0.46
CDT1-202ENST00000562747 BRCC3P46736 316 aa17.93■□□□□ 0.46
CDT1-202ENST00000562747 KCNB1Q14721 858 aa17.93■□□□□ 0.46
CDT1-202ENST00000562747 C15orf39Q6ZRI6 1047 aa17.93■□□□□ 0.46
CDT1-202ENST00000562747 C12orf56Q8IXR9 622 aa17.93■□□□□ 0.46
CDT1-202ENST00000562747 CCDC105Q8IYK2 499 aa17.93■□□□□ 0.46
CDT1-202ENST00000562747 ZSWIM2Q8NEG5 633 aa17.93■□□□□ 0.46
CDT1-202ENST00000562747 GOLGA5Q8TBA6 731 aa17.93■□□□□ 0.46
CDT1-202ENST00000562747 LNX1Q8TBB1 728 aaPredicted RBP17.93■□□□□ 0.46
CDT1-202ENST00000562747 RBAKQ9NYW8 714 aaPredicted RBP17.93■□□□□ 0.46
CDT1-202ENST00000562747 HSPBP1Q9NZL4 362 aa17.93■□□□□ 0.46
CDT1-202ENST00000562747 VWA8A3KMH1 1905 aa17.92■□□□□ 0.46
CDT1-202ENST00000562747 GOLGA8IPA6NC78 632 aa17.92■□□□□ 0.46
CDT1-202ENST00000562747 GOLGA8JA6NMD2 632 aa17.92■□□□□ 0.46
CDT1-202ENST00000562747 KIF20AO95235 890 aa17.92■□□□□ 0.46
CDT1-202ENST00000562747 GLUD1P00367 558 aa17.92■□□□□ 0.46
CDT1-202ENST00000562747 PAX3P23760 479 aa17.92■□□□□ 0.46
CDT1-202ENST00000562747 TKTP29401 623 aaKnown RBP17.92■□□□□ 0.46
CDT1-202ENST00000562747 MCM4P33991 863 aa17.92■□□□□ 0.46
CDT1-202ENST00000562747 PSMD5Q16401 504 aa17.92■□□□□ 0.46
CDT1-202ENST00000562747 PRSS55Q6UWB4 352 aaPredicted RBP17.92■□□□□ 0.46
CDT1-202ENST00000562747 ANKS3Q6ZW76 656 aa17.92■□□□□ 0.46
CDT1-202ENST00000562747 CMASQ8NFW8 434 aaPredicted RBP17.92■□□□□ 0.46
CDT1-202ENST00000562747 SUSD3Q96L08 255 aa17.92■□□□□ 0.46
CDT1-202ENST00000562747 DPP7Q9UHL4 492 aa17.92■□□□□ 0.46
CDT1-202ENST00000562747 HOOK1Q9UJC3 728 aaKnown RBP17.92■□□□□ 0.46
CDT1-202ENST00000562747 FBXL21Q9UKT6 434 aa17.92■□□□□ 0.46
CDT1-202ENST00000562747 GVINP1Q7Z2Y8 2422 aa17.92■□□□□ 0.46
CDT1-202ENST00000562747 DCHS1Q96JQ0 3298 aa17.91■□□□□ 0.46
CDT1-202ENST00000562747 PTPRZ1P23471 2315 aaPredicted RBP17.91■□□□□ 0.46
CDT1-202ENST00000562747 ZNF233A6NK53 670 aa17.91■□□□□ 0.46
CDT1-202ENST00000562747 I3L4J1 428 aa17.91■□□□□ 0.46
CDT1-202ENST00000562747 RFPL2O75678 378 aa17.91■□□□□ 0.46
CDT1-202ENST00000562747 AARSP49588 968 aaKnown RBP eCLIP17.91■□□□□ 0.46
CDT1-202ENST00000562747 SURF1Q15526 300 aa17.91■□□□□ 0.46
CDT1-202ENST00000562747 ELMSAN1Q6PJG2 1045 aa17.91■□□□□ 0.46
CDT1-202ENST00000562747 EFCAB13Q8IY85 973 aa17.91■□□□□ 0.46
CDT1-202ENST00000562747 ELOA2Q8IYF1 753 aaPredicted RBP17.91■□□□□ 0.46
CDT1-202ENST00000562747 NOC3LQ8WTT2 800 aaKnown RBP17.91■□□□□ 0.46
CDT1-202ENST00000562747 HDAC7Q8WUI4 952 aa17.91■□□□□ 0.46
CDT1-202ENST00000562747 NKD2Q969F2 451 aaPredicted RBP17.91■□□□□ 0.46
CDT1-202ENST00000562747 ZNF707Q96C28 371 aaPredicted RBP17.91■□□□□ 0.46
CDT1-202ENST00000562747 MYADMQ96S97 322 aa17.91■□□□□ 0.46
CDT1-202ENST00000562747 MTRRQ9UBK8 725 aa17.91■□□□□ 0.46
CDT1-202ENST00000562747 CLUHO75153 1309 aa17.91■□□□□ 0.46
CDT1-202ENST00000562747 MTCL1Q9Y4B5 1905 aaKnown RBP17.9■□□□□ 0.46
CDT1-202ENST00000562747 CCDC195A0A1B0GUA6 201 aa17.9■□□□□ 0.46
CDT1-202ENST00000562747 ANO9A1A5B4 782 aa17.9■□□□□ 0.46
CDT1-202ENST00000562747 KRBA1A5PL33 1030 aa17.9■□□□□ 0.46
CDT1-202ENST00000562747 PIRO00625 290 aa17.9■□□□□ 0.46
CDT1-202ENST00000562747 CLIC2O15247 247 aa17.9■□□□□ 0.46
CDT1-202ENST00000562747 CFHP08603 1231 aa17.9■□□□□ 0.46
CDT1-202ENST00000562747 SPATA31D3P0C874 917 aa17.9■□□□□ 0.46
CDT1-202ENST00000562747 GUCY2FP51841 1108 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms