RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 CXorf49A8MYA2 514 aaPredicted RBP7.8□□□□□ -1.16
SMG1-204ENST00000561940 FZD7O75084 574 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 MYF5P13349 255 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 IL2RBP14784 551 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 NPR1P16066 1061 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 SMARCA1P28370 1054 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 PRDX5P30044 214 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 PIK3CBP42338 1070 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 ALDH5A1P51649 535 aaPredicted RBP7.8□□□□□ -1.16
SMG1-204ENST00000561940 SP140Q13342 867 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 POLD3Q15054 466 aaPredicted RBP7.8□□□□□ -1.16
SMG1-204ENST00000561940 FAM47AQ5JRC9 791 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 EFCAB12Q6NXP0 572 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 XRRA1Q6P2D8 792 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 SRLQ86TD4 932 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 PLXDC1Q8IUK5 500 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 SPICE1Q8N0Z3 855 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 OR10H5Q8NGA6 315 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 GJA10Q969M2 543 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 MTFMTQ96DP5 389 aaKnown RBP7.8□□□□□ -1.16
SMG1-204ENST00000561940 NDC1Q9BTX1 674 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 C11orf54Q9H0W9 315 aaPredicted RBP7.8□□□□□ -1.16
SMG1-204ENST00000561940 MMRN2Q9H8L6 949 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 CORO2BQ9UQ03 480 aa7.8□□□□□ -1.16
SMG1-204ENST00000561940 GRXCR1A8MXD5 290 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 B5MCH6 92 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 PHGDHO43175 533 aaKnown RBP7.79□□□□□ -1.16
SMG1-204ENST00000561940 NARSO43776 548 aaKnown RBP7.79□□□□□ -1.16
SMG1-204ENST00000561940 AKAP8O43823 692 aaKnown RBP7.79□□□□□ -1.16
SMG1-204ENST00000561940 MGEA5O60502 916 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 ARIH2O95376 493 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 GDF5P43026 501 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 TM4SF4P48230 202 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 PRIM2P49643 509 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 FLT3LGP49771 235 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 AK2P54819 239 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 NHLH2Q02577 135 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 BMT2Q1RMZ1 405 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 NAIF1Q69YI7 327 aaPredicted RBP7.79□□□□□ -1.16
SMG1-204ENST00000561940 FAM90A1Q86YD7 464 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 SYT12Q8IV01 421 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 KRT78Q8N1N4 520 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 ANKS1AQ92625 1134 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 FAM167AQ96KS9 214 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 ARPC5LQ9BPX5 153 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 MRPL46Q9H2W6 279 aaKnown RBP7.79□□□□□ -1.16
SMG1-204ENST00000561940 TRPM5Q9NZQ8 1165 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 TPCN1Q9ULQ1 816 aa7.79□□□□□ -1.16
SMG1-204ENST00000561940 A0A1W2PPL8 197 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 PLEKHD1A6NEE1 506 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 KPNA5O15131 536 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 GRM6O15303 877 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 SLC7A1P30825 629 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 PHKA1P46020 1223 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 HTR3AP46098 478 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 RNASE9P60153 205 aaKnown RBP7.78□□□□□ -1.16
SMG1-204ENST00000561940 ZNF276Q8N554 614 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 MRI1Q9BV20 369 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 TEX101Q9BY14 249 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 WDCPQ9H6R7 721 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 NRDE2Q9H7Z3 1164 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 SLAMF7Q9NQ25 335 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 PNPLA7Q6ZV29 1317 aa7.78□□□□□ -1.16
SMG1-204ENST00000561940 TCRBV7S2A1N4TA0A589 114 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 AHRRA9YTQ3 701 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 RECQL4O94761 1208 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 SLC6A4P31645 630 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 CLRN1P58418 232 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 EXOSC9Q06265 439 aaKnown RBP7.77□□□□□ -1.17
SMG1-204ENST00000561940 KLF10Q13118 480 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 KHDC1LQ5JSQ8 128 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 METTL24Q5JXM2 366 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 ATXN7L2Q5T6C5 722 aaPredicted RBP7.77□□□□□ -1.17
SMG1-204ENST00000561940 C11orf96Q7Z7L8 435 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 CERS3Q8IU89 383 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 VPS37AQ8NEZ2 397 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 BRIX1Q8TDN6 353 aaKnown RBP7.77□□□□□ -1.17
SMG1-204ENST00000561940 TNPO1Q92973 898 aaKnown RBP7.77□□□□□ -1.17
SMG1-204ENST00000561940 APIPQ96GX9 242 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 TNIP3Q96KP6 325 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 MRGPRX1Q96LB2 322 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 NUP62CLQ9H1M0 184 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 MOCS1Q9NZB8 636 aa7.77□□□□□ -1.17
SMG1-204ENST00000561940 ING1Q9UK53 422 aaPredicted RBP7.77□□□□□ -1.17
SMG1-204ENST00000561940 LOC102724159A0A0B4J2E5 919 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 RHPN2P1A8MT19 583 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 MYO1FO00160 1098 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 TBX3O15119 743 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 ZNF185O15231 689 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 FRS3O43559 492 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 MATN4O95460 622 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 FTH1P19P0C7X4 201 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 HDCP19113 662 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 NR4A1P22736 598 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 ACVRL1P37023 503 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 FAM189BP81408 668 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 MORC3Q14149 939 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 PWP2Q15269 919 aaKnown RBP7.76□□□□□ -1.17
SMG1-204ENST00000561940 GORABQ5T7V8 394 aa7.76□□□□□ -1.17
SMG1-204ENST00000561940 OTUD7BQ6GQQ9 843 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms