RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ERVFC1P60507 584 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 TYRO3Q06418 890 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 SMARCB1Q12824 385 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 MAPRE1Q15691 268 aaKnown RBP11.51□□□□□ -0.57
TPM1-229ENST00000561242 TCEAL5Q5H9L2 206 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 PALB2Q86YC2 1186 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 OR6B3Q8NGW1 331 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 FAM200AQ8TCP9 573 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 EEF2KMTQ96G04 330 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 FAM81BQ96LP2 452 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 POP1Q99575 1024 aaKnown RBP11.51□□□□□ -0.57
TPM1-229ENST00000561242 THAP9Q9H5L6 903 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 FNIP2Q9P278 1114 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 ATP8B3O60423 1300 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 LRRIQ3A6PVS8 624 aaPredicted RBP11.5□□□□□ -0.57
TPM1-229ENST00000561242 PIRO00625 290 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 PER2O15055 1255 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 XYLBO75191 536 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 ARHGEF15O94989 841 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 SLC34A2O95436 690 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 LRG1P02750 347 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 AFPP02771 609 aaKnown RBP11.5□□□□□ -0.57
TPM1-229ENST00000561242 TPM3P06753 285 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 HOXB8P17481 243 aaPredicted RBP11.5□□□□□ -0.57
TPM1-229ENST00000561242 POU3F3P20264 500 aaPredicted RBP11.5□□□□□ -0.57
TPM1-229ENST00000561242 GNL1P36915 607 aaPredicted RBP11.5□□□□□ -0.57
TPM1-229ENST00000561242 ALDH1A3P47895 512 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 CASP4P49662 377 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 GUCY2FP51841 1108 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 SLC8A3P57103 927 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 MYL5Q02045 173 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 PLD1Q13393 1074 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 NFKBIBQ15653 356 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 ZBTB6Q15916 424 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 PPM1LQ5SGD2 360 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 VARS2Q5ST30 1063 aaKnown RBP11.5□□□□□ -0.57
TPM1-229ENST00000561242 IQCEQ6IPM2 695 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 TOP6BLQ8N6T0 577 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 FBXL13Q8NEE6 735 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 PIK3R5Q8WYR1 880 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 TNIP3Q96KP6 325 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 GPR62Q9BZJ7 368 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 ZBP1Q9H171 429 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 PLEKHA4Q9H4M7 779 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 POLIQ9UNA4 740 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 SCN5AQ14524 2016 aa11.5□□□□□ -0.57
TPM1-229ENST00000561242 SYCE3A1L190 88 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 C2orf71A6NGG8 1288 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 A8MXQ7 604 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 I3L4J1 428 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 P4HA2O15460 535 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 FAM189A1O60320 539 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 FAM163BP0C2L3 166 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 TRIM49P0CI25 452 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 TRIM49CP0CI26 452 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 EEF1GP26641 437 aaKnown RBP11.49□□□□□ -0.57
TPM1-229ENST00000561242 TKTP29401 623 aaKnown RBP11.49□□□□□ -0.57
TPM1-229ENST00000561242 OR1D2P34982 312 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 ZNF165P49910 485 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 SOX4Q06945 474 aaPredicted RBP11.49□□□□□ -0.57
TPM1-229ENST00000561242 VEPH1Q14D04 833 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 PTPN14Q15678 1187 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 NFE2Q16621 373 aaPredicted RBP11.49□□□□□ -0.57
TPM1-229ENST00000561242 DPCR1Q3MIW9 517 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 ATAT1Q5SQI0 421 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 GBP6Q6ZN66 633 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 C4orf50Q6ZRC1 276 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 SV2AQ7L0J3 742 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 SPATA2LQ8IUW3 424 aaPredicted RBP11.49□□□□□ -0.57
TPM1-229ENST00000561242 EFCAB13Q8IY85 973 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 ADGRF2Q8IZF7 708 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 C1orf127Q8N9H9 656 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 SPATA18Q8TC71 538 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 ENOX1Q8TC92 643 aaKnown RBP11.49□□□□□ -0.57
TPM1-229ENST00000561242 AUTS2Q8WXX7 1259 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 RIPOR3Q96MK2 946 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 GUCD1Q96NT3 240 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 KLHL5Q96PQ7 755 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 PAAF1Q9BRP4 392 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 MED10Q9BTT4 135 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 GZF1Q9H116 711 aaPredicted RBP11.49□□□□□ -0.57
TPM1-229ENST00000561242 CYP4F11Q9HBI6 524 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 MARCH5Q9NX47 278 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 RAB20Q9NX57 234 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 CACNG4Q9UBN1 327 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 MAFFQ9ULX9 164 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 NFE2L3Q9Y4A8 694 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 TIMM13Q9Y5L4 95 aaPredicted RBP11.49□□□□□ -0.57
TPM1-229ENST00000561242 BACE2Q9Y5Z0 518 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 CDY1Q9Y6F8 540 aa11.49□□□□□ -0.57
TPM1-229ENST00000561242 CENPFP49454 3210 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 PDE4DIPQ5VU43 2346 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 ANO9A1A5B4 782 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 EPOPA6NHQ4 379 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 KCNJ18B7U540 433 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 SERPINC1P01008 464 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 HLA-DRAP01903 254 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 CD44P16070 742 aaKnown RBP11.48□□□□□ -0.57
TPM1-229ENST00000561242 FGFR3P22607 806 aa11.48□□□□□ -0.57
TPM1-229ENST00000561242 TBXAS1P24557 533 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms