RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 KLHL23Q8NBE8 558 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 EHBP1Q8NDI1 1231 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 TAF4BQ92750 862 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 SEMA4DQ92854 862 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 ELMO3Q96BJ8 720 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 IGSF21Q96ID5 467 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 SAMD11Q96NU1 681 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 MMS19Q96T76 1030 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 PLVAPQ9BX97 442 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 IFNKQ9P0W0 207 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 GCNT4Q9P109 453 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 PUF60Q9UHX1 559 aaKnown RBP15.42■□□□□ 0.06
SMAD6-204ENST00000559931 TMEM189-UBE2V1I3L0A0 370 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 CYB561D2O14569 222 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 PMM2O15305 246 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 CBFA2T2O43439 604 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 FGF18O76093 207 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 ARHGEF15O94989 841 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 RB1P06400 928 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 P4HA1P13674 534 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 PAX3P23760 479 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 ERVK-21P61565 698 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 UVSSAQ2YD98 709 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 TIGD5Q53EQ6 642 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 FAM171A1Q5VUB5 890 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 KIAA1841Q6NSI8 718 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 TMEM173Q86WV6 379 aaPredicted RBP15.41■□□□□ 0.06
SMAD6-204ENST00000559931 CEP57Q86XR8 500 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 C3orf58Q8NDZ4 430 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 FBXO22Q8NEZ5 403 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 CXorf38Q8TB03 319 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 ARNTL2Q8WYA1 636 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 FAM161BQ96MY7 647 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 NAP1L5Q96NT1 182 aaPredicted RBP15.41■□□□□ 0.06
SMAD6-204ENST00000559931 INTS2Q9H0H0 1204 aaKnown RBP15.41■□□□□ 0.06
SMAD6-204ENST00000559931 RTN4Q9NQC3 1192 aaKnown RBP15.41■□□□□ 0.06
SMAD6-204ENST00000559931 MARCH5Q9NX47 278 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 COQ4Q9Y3A0 265 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 SNX9Q9Y5X1 595 aa15.41■□□□□ 0.06
SMAD6-204ENST00000559931 SF3B1O75533 1304 aaKnown RBP eCLIP15.41■□□□□ 0.068e-6■■■■■ 107
SMAD6-204ENST00000559931 SZT2Q5T011 3432 aa15.4■□□□□ 0.06
SMAD6-204ENST00000559931 GTPBP10A4D1E9 387 aaKnown RBP15.4■□□□□ 0.06
SMAD6-204ENST00000559931 SPTLC1O15269 473 aa15.4■□□□□ 0.06
SMAD6-204ENST00000559931 HUS1O60921 280 aa15.4■□□□□ 0.06
SMAD6-204ENST00000559931 LRRN2O75325 713 aa15.4■□□□□ 0.06
SMAD6-204ENST00000559931 ASS1P00966 412 aaKnown RBP15.4■□□□□ 0.06
SMAD6-204ENST00000559931 SLC9A1P19634 815 aa15.4■□□□□ 0.06
SMAD6-204ENST00000559931 ELAVL2Q12926 359 aaKnown RBP15.4■□□□□ 0.06
SMAD6-204ENST00000559931 SPOPLQ6IQ16 392 aa15.4■□□□□ 0.06
SMAD6-204ENST00000559931 FUT10Q6P4F1 479 aa15.4■□□□□ 0.06
SMAD6-204ENST00000559931 APTXQ7Z2E3 356 aaKnown RBP15.4■□□□□ 0.06
SMAD6-204ENST00000559931 SPRED2Q7Z698 418 aa15.4■□□□□ 0.06
SMAD6-204ENST00000559931 METTL23Q86XA0 190 aa15.4■□□□□ 0.06
SMAD6-204ENST00000559931 BCL7CQ8WUZ0 217 aaPredicted RBP15.4■□□□□ 0.06
SMAD6-204ENST00000559931 SENP8Q96LD8 212 aa15.4■□□□□ 0.06
SMAD6-204ENST00000559931 NT5C1BQ96P26 610 aa15.4■□□□□ 0.06
SMAD6-204ENST00000559931 C11orf84Q9BUA3 381 aaPredicted RBP15.4■□□□□ 0.06
SMAD6-204ENST00000559931 TRIM5Q9C035 493 aa15.4■□□□□ 0.06
SMAD6-204ENST00000559931 ALG13Q9NP73 1137 aaKnown RBP15.4■□□□□ 0.06
SMAD6-204ENST00000559931 A0A1B0GTH6 734 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 ARHGEF37A1IGU5 675 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 GOLGA6L3A6NEY3 463 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 TEX33O43247 280 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 LINC00271P0C7V0 271 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 ODC1P11926 461 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 PON1P27169 355 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 CA8P35219 290 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 NOP14P78316 857 aaKnown RBP15.39■□□□□ 0.05
SMAD6-204ENST00000559931 GPM6BQ13491 265 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 BMS1Q14692 1282 aaKnown RBP15.39■□□□□ 0.05
SMAD6-204ENST00000559931 NR1I3Q14994 352 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 SYCP1Q15431 976 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 CD300LGQ6UXG3 332 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 Q7L0L9 218 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 DDX53Q86TM3 631 aaKnown RBP15.39■□□□□ 0.05
SMAD6-204ENST00000559931 APPL2Q8NEU8 664 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 MICAL1Q8TDZ2 1067 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 TATDN2Q93075 761 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 SUSD3Q96L08 255 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 LSM14BQ9BX40 385 aaKnown RBP15.39■□□□□ 0.05
SMAD6-204ENST00000559931 GPR62Q9BZJ7 368 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 XPO4Q9C0E2 1151 aaKnown RBP15.39■□□□□ 0.05
SMAD6-204ENST00000559931 XYLT2Q9H1B5 865 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 POLIQ9UNA4 740 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 CHD9Q3L8U1 2897 aa15.39■□□□□ 0.05
SMAD6-204ENST00000559931 CSPG5O95196 566 aa15.38■□□□□ 0.05
SMAD6-204ENST00000559931 STAU1O95793 577 aaKnown RBP15.38■□□□□ 0.05
SMAD6-204ENST00000559931 PLCB3Q01970 1234 aa15.38■□□□□ 0.05
SMAD6-204ENST00000559931 USP41Q3LFD5 358 aa15.38■□□□□ 0.05
SMAD6-204ENST00000559931 ZNF697Q5TEC3 545 aa15.38■□□□□ 0.05
SMAD6-204ENST00000559931 TRIM65Q6PJ69 517 aa15.38■□□□□ 0.05
SMAD6-204ENST00000559931 SCARA5Q6ZMJ2 495 aa15.38■□□□□ 0.05
SMAD6-204ENST00000559931 TAS1R1Q7RTX1 841 aa15.38■□□□□ 0.05
SMAD6-204ENST00000559931 VPS52Q8N1B4 723 aa15.38■□□□□ 0.05
SMAD6-204ENST00000559931 PPM1KQ8N3J5 372 aa15.38■□□□□ 0.05
SMAD6-204ENST00000559931 LMO3Q8TAP4 145 aa15.38■□□□□ 0.05
SMAD6-204ENST00000559931 B3GALT6Q96L58 329 aa15.38■□□□□ 0.05
SMAD6-204ENST00000559931 TTYH1Q9H313 450 aaPredicted RBP15.38■□□□□ 0.05
SMAD6-204ENST00000559931 ZNF576Q9H609 170 aa15.38■□□□□ 0.05
SMAD6-204ENST00000559931 UBE2TQ9NPD8 197 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms