RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 ITGAMP11215 1152 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 VAV2P52735 878 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 GNAI1P63096 354 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 FSTL1Q12841 308 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 NOGQ13253 232 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 CCDC93Q567U6 631 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 CATIPQ7Z7H3 387 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 GPR149Q86SP6 731 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 HPS3Q969F9 1004 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 MVB12AQ96EY5 273 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 FAM167AQ96KS9 214 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 KLHL32Q96NJ5 620 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 AGAP2Q99490 1192 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 TLR10Q9BXR5 811 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 RHOBTB2Q9BYZ6 727 aa4.79□□□□□ -1.64
VPS13C-207ENST00000558919 UNKLQ9H9P5 680 aaKnown RBP4.79□□□□□ -1.64
VPS13C-207ENST00000558919 A0A1W2PS29 197 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 LRRC14BA6NHZ5 514 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 AKAP10O43572 662 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 ZFPL1O95159 310 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 KCNA2P16389 499 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 FDXRP22570 491 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 PROZP22891 400 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 PRDX5P30044 214 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 POU6F2P78424 691 aaPredicted RBP4.78□□□□□ -1.64
VPS13C-207ENST00000558919 PIGFQ07326 219 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 ZNF844Q08AG5 666 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 ATAT1Q5SQI0 421 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 SP5Q6BEB4 398 aaPredicted RBP4.78□□□□□ -1.64
VPS13C-207ENST00000558919 HEATR3Q7Z4Q2 680 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 FAM90A1Q86YD7 464 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 SLC17A8Q8NDX2 589 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 BEND2Q8NDZ0 799 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 TMIEQ8NEW7 156 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 SCAMP4Q969E2 229 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 CAVIN3Q969G5 261 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 BRD9Q9H8M2 597 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 TBCCD1Q9NVR7 557 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 CFAP97Q9P2B7 532 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 TESQ9UGI8 421 aaKnown RBP4.78□□□□□ -1.64
VPS13C-207ENST00000558919 ZNF180Q9UJW8 692 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 SLC45A2Q9UMX9 530 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 CDYLQ9Y232 598 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 PCDHA3Q9Y5H8 950 aa4.78□□□□□ -1.64
VPS13C-207ENST00000558919 EPN1Q9Y6I3 576 aaPredicted RBP4.78□□□□□ -1.64
VPS13C-207ENST00000558919 MAST3O60307 1309 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 PRAMEF33A0A0G2JMD5 474 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 PRAMEF10O60809 474 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 OFD1O75665 1012 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 RFPL1O75677 317 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 TYRP14679 529 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 PIK3CGP48736 1102 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 RAB27AP51159 221 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 MAP2K6P52564 334 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 SEC24CP53992 1094 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 COL10A1Q03692 680 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-207ENST00000558919 CLNKQ7Z7G1 428 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 CFAP52Q8N1V2 620 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 PDPRQ8NCN5 879 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 JPH3Q8WXH2 748 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-207ENST00000558919 SLC9A6Q92581 669 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 AIFM3Q96NN9 605 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 MAP3K14Q99558 947 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 RTFDC1Q9BY42 306 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-207ENST00000558919 IMPG2Q9BZV3 1241 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 CDH19Q9H159 772 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 GPR35Q9HC97 309 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 LMBRD1Q9NUN5 540 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 CTTNBP2NLQ9P2B4 639 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 ABCF2Q9UG63 623 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 FEZ2Q9UHY8 353 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-207ENST00000558919 ZDHHC8Q9ULC8 765 aa4.77□□□□□ -1.65
VPS13C-207ENST00000558919 CCDC195A0A1B0GUA6 201 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 PRSS29PA6NIE9 313 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 E7ENX8 843 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 ESRRBO95718 433 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 CHEK2O96017 543 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 IL12RB1P42701 662 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 INHBEP58166 350 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 RPS7P62081 194 aaKnown RBP4.76□□□□□ -1.65
VPS13C-207ENST00000558919 NKX6-1P78426 367 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-207ENST00000558919 TAP2Q03519 686 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 FOXI1Q12951 378 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 MPP3Q13368 585 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 KIF22Q14807 665 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 GEN1Q17RS7 908 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 PLEKHG6Q3KR16 790 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 IFIT1BQ5T764 474 aaKnown RBP4.76□□□□□ -1.65
VPS13C-207ENST00000558919 LNX2Q8N448 690 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 C1GALT1C1Q96EU7 318 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 Q96MF0 132 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 C1orf43Q9BWL3 253 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 SIK2Q9H0K1 926 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 MRPL46Q9H2W6 279 aaKnown RBP4.76□□□□□ -1.65
VPS13C-207ENST00000558919 SLC12A5Q9H2X9 1139 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 PNPOQ9NVS9 261 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 VSX1Q9NZR4 365 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-207ENST00000558919 DMTF1Q9Y222 760 aa4.76□□□□□ -1.65
VPS13C-207ENST00000558919 TRGV11A0A075B6L2 103 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms