RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 DUOXA2Q1HG44 320 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 ODF2Q5BJF6 829 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 PRRT2Q7Z6L0 340 aaPredicted RBP8.86□□□□□ -0.99
SPG11-209ENST00000558253 YTHDF3Q7Z739 585 aaKnown RBP8.86□□□□□ -0.99
SPG11-209ENST00000558253 SRLQ86TD4 932 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 ERO1BQ86YB8 467 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 BRSK2Q8IWQ3 736 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 CCDC105Q8IYK2 499 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 KATNAL2Q8IYT4 538 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 RCOR2Q8IZ40 523 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 SHCBP1Q8NEM2 672 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 ATL2Q8NHH9 583 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 BCAS4Q8TDM0 211 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 ATP8B4Q8TF62 1192 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 ZNF516Q92618 1163 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 P3H4Q92791 437 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 KAT5Q92993 513 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 ART4Q93070 314 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 POP1Q99575 1024 aaKnown RBP8.86□□□□□ -0.99
SPG11-209ENST00000558253 HINFPQ9BQA5 517 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 KIFC3Q9BVG8 833 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 NFKBIZQ9BYH8 718 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 FRMD8P1Q9BZ68 369 aaPredicted RBP8.86□□□□□ -0.99
SPG11-209ENST00000558253 IL21Q9HBE4 155 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 ANAPC7Q9UJX3 599 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 CEP83Q9Y592 693 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 SNCAIPQ9Y6H5 919 aa8.86□□□□□ -0.99
SPG11-209ENST00000558253 BRCA1P38398 1863 aaKnown RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 ZNF541Q9H0D2 1346 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 CNTNAP2Q9UHC6 1331 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 PARP14Q460N5 1801 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 IGKV6-21A0A0C4DH24 114 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 ASB14A6NK59 587 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 TMEM110-MUSTN1A8MSY1 372 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 NDUFAB1O14561 156 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 OGTO15294 1046 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 MED7O43513 233 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 FAM107AO95990 144 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 AGTP01019 485 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 RARAP10276 462 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 UBA1P22314 1058 aaKnown RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 EIF4BP23588 611 aaKnown RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 POLR2BP30876 1174 aaKnown RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 LSP1P33241 339 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 RDXP35241 583 aaKnown RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 ZNF132P52740 706 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 CORO7P57737 925 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 PPP2R2AP63151 447 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 MRPS25P82663 173 aaKnown RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 SP2Q02086 613 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 DGKZQ13574 1117 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 NCOA4Q13772 614 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 VGLL4Q14135 290 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 TTLL12Q14166 644 aaPredicted RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 UAP1Q16222 522 aaPredicted RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 PTGISQ16647 500 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 MAPK6Q16659 721 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 TDRD10Q5VZ19 366 aaKnown RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 PLEKHA7Q6IQ23 1121 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 DRICH1Q6PGQ1 229 aaPredicted RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 CRELD2Q6UXH1 353 aaPredicted RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 TSHZ1Q6ZSZ6 1077 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 SEPT14Q6ZU15 432 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 MON1BQ7L1V2 547 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 DNAAF5Q86Y56 855 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 RELL1Q8IUW5 271 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 ANKRD13AQ8IZ07 590 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 CCDC89Q8N998 374 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 TMEM35BQ8NCS4 154 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 ZSWIM2Q8NEG5 633 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 EXD1Q8NHP7 514 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 ASAP3Q8TDY4 903 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 KRT35Q92764 455 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 TMEM143Q96AN5 459 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 RBM41Q96IZ5 413 aaKnown RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 SH2D3AQ9BRG2 576 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 MIS12Q9H081 205 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 SMARCAD1Q9H4L7 1026 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 DDX56Q9NY93 547 aaKnown RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 ADAM22Q9P0K1 906 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 RSPH14Q9UHP6 348 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 STRIP2Q9ULQ0 834 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 EFR3BQ9Y2G0 817 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 RRP15Q9Y3B9 282 aaKnown RBP8.85□□□□□ -0.99
SPG11-209ENST00000558253 PCDHB4Q9Y5E5 795 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 PCDHB3Q9Y5E6 796 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 RLFQ13129 1914 aa8.85□□□□□ -0.99
SPG11-209ENST00000558253 A0A087WUV0 522 aaPredicted RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 SPDYE5A6NIY4 337 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 NOP56O00567 594 aaKnown RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 ACKR2O00590 384 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 MAGEB2O15479 319 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 HBP1O60381 514 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 B4GALT4O60513 344 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 VNN1O95497 513 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 ASS1P00966 412 aaKnown RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 TNNC2P02585 160 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 GNA15P30679 374 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 SSTR3P32745 418 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms