RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 SH2D3CQ8N5H7 860 aa5.87□□□□□ -1.47
SCFD1-221ENST00000556534 PNKPQ96T60 521 aa5.87□□□□□ -1.47
SCFD1-221ENST00000556534 VKORC1Q9BQB6 163 aa5.87□□□□□ -1.47
SCFD1-221ENST00000556534 GNL3LQ9NVN8 582 aaKnown RBP5.87□□□□□ -1.47
SCFD1-221ENST00000556534 CDYLQ9Y232 598 aa5.87□□□□□ -1.47
SCFD1-221ENST00000556534 H3BUI4 141 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 TUSC2O75896 110 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 PARNO95453 639 aaKnown RBP5.86□□□□□ -1.47
SCFD1-221ENST00000556534 ABHD16AO95870 558 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 GPANK1O95872 356 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 AHSGP02765 367 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 HLA-DOAP06340 250 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 ADH4P08319 380 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 GNAI3P08754 354 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 ACVRL1P37023 503 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 GNAI1P63096 354 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 RESTQ13127 1097 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 CCDC157Q569K6 752 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 KCNV1Q6PIU1 500 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 FMNL3Q8IVF7 1028 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 ARHGEF19Q8IW93 802 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 CELF5Q8N6W0 485 aaKnown RBP5.86□□□□□ -1.47
SCFD1-221ENST00000556534 Q8NA96 180 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 PDPRQ8NCN5 879 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 PROKR1Q8TCW9 393 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 SCAMP4Q969E2 229 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 SCAND2PQ9GZW5 306 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-221ENST00000556534 BRD9Q9H8M2 597 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 GPR35Q9HC97 309 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 SLAMF7Q9NQ25 335 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 CFAP97Q9P2B7 532 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 ZDHHC8Q9ULC8 765 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 PCDHA1Q9Y5I3 950 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 HS3ST3A1Q9Y663 406 aa5.86□□□□□ -1.47
SCFD1-221ENST00000556534 UNC119BA6NIH7 251 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 A6NNZ2 444 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 ZNF785A8K8V0 405 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 ERC2O15083 957 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 CDKL5O76039 1030 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 SPDEFO95238 335 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 RARBP10826 455 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 MCM7P33993 719 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 AGFG1P52594 562 aaKnown RBP5.85□□□□□ -1.47
SCFD1-221ENST00000556534 PSMC1P62191 440 aaKnown RBP5.85□□□□□ -1.47
SCFD1-221ENST00000556534 SCAPQ12770 1279 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 TP53BP2Q13625 1128 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 EMC10Q5UCC4 262 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 ARMC6Q6NXE6 501 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 Q6ZPA2 131 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 ZNF627Q7L945 461 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 AOPEPQ8N6M6 819 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 BRIX1Q8TDN6 353 aaKnown RBP5.85□□□□□ -1.47
SCFD1-221ENST00000556534 LARP4BQ92615 738 aaKnown RBP5.85□□□□□ -1.47
SCFD1-221ENST00000556534 TNPO1Q92973 898 aaKnown RBP5.85□□□□□ -1.47
SCFD1-221ENST00000556534 FUBP1Q96AE4 644 aaKnown RBP5.85□□□□□ -1.47
SCFD1-221ENST00000556534 NACC2Q96BF6 587 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 MTFMTQ96DP5 389 aaKnown RBP5.85□□□□□ -1.47
SCFD1-221ENST00000556534 RNF31Q96EP0 1072 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 MED15Q96RN5 788 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 B3GNT5Q9BYG0 378 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 ALOXE3Q9BYJ1 711 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 IMPG2Q9BZV3 1241 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 RNF181Q9P0P0 153 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 CTTNBP2NLQ9P2B4 639 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 ANKFY1Q9P2R3 1169 aa5.85□□□□□ -1.47
SCFD1-221ENST00000556534 DDX20Q9UHI6 824 aaKnown RBP5.85□□□□□ -1.47
SCFD1-221ENST00000556534 A0A088AWK7 358 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 CTNND1O60716 968 aaKnown RBP5.84□□□□□ -1.47
SCFD1-221ENST00000556534 PHKA1P46020 1223 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 ZNF135P52742 658 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-221ENST00000556534 GUCY1B3Q02153 619 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 EXOSC9Q06265 439 aaKnown RBP5.84□□□□□ -1.47
SCFD1-221ENST00000556534 KLF10Q13118 480 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 CYP2A13Q16696 494 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 CRB2Q5IJ48 1285 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 LY6G5CQ5SRR4 150 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 C14orf80Q86SX3 495 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 CFAP52Q8N1V2 620 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 SLC17A8Q8NDX2 589 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 TTC8Q8TAM2 541 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 ASB10Q8WXI3 467 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 BOD1Q96IK1 185 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 TINAGL1Q9GZM7 467 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-221ENST00000556534 TMEM60Q9H2L4 133 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 ARMT1Q9H993 441 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-221ENST00000556534 C1orf112Q9NSG2 853 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 TMEM74BQ9NUR3 256 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 MRPS18AQ9NVS2 196 aaKnown RBP5.84□□□□□ -1.47
SCFD1-221ENST00000556534 STAP2Q9UGK3 403 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 AGAP1Q9UPQ3 857 aa5.84□□□□□ -1.47
SCFD1-221ENST00000556534 VSTM5A8MXK1 200 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 FAM227AF5H4B4 570 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 POU6F2P78424 691 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-221ENST00000556534 MXRA7P84157 204 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 TCF15Q12870 199 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 GEN1Q17RS7 908 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 ANO6Q4KMQ2 910 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 SWSAP1Q6NVH7 229 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 TAPT1Q6NXT6 567 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms