RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CCDC175P0C221 793 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 SUPT20HL2P0C7V6 817 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 EPB41P11171 864 aaKnown RBP7.41□□□□□ -1.22
SLIRP-204ENST00000555890 PLS3P13797 630 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 NMT1P30419 496 aaKnown RBP7.41□□□□□ -1.22
SLIRP-204ENST00000555890 ABCD1P33897 745 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 CASP5P51878 434 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 ACTR2P61160 394 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 SNRPFP62306 86 aaKnown RBP7.41□□□□□ -1.22
SLIRP-204ENST00000555890 ZBED6P86452 979 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 MYBPC2Q14324 1141 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 XKR3Q5GH77 459 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 WDR78Q5VTH9 848 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 SWSAP1Q6NVH7 229 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 C19orf48Q6RUI8 117 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 ABHD15Q6UXT9 468 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 SEPT14Q6ZU15 432 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 TRIM59Q8IWR1 403 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 MCPH1Q8NEM0 835 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 NEK11Q8NG66 645 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 KIF18AQ8NI77 898 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 NETO1Q8TDF5 533 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 KIFAP3Q92845 792 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 PABPC5Q96DU9 382 aaKnown RBP7.41□□□□□ -1.22
SLIRP-204ENST00000555890 PPP1R13BQ96KQ4 1090 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 ACCSQ96QU6 501 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 NIFKQ9BYG3 293 aaKnown RBP7.41□□□□□ -1.22
SLIRP-204ENST00000555890 GBP3Q9H0R5 595 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 NUCKS1Q9H1E3 243 aaKnown RBP7.41□□□□□ -1.22
SLIRP-204ENST00000555890 MMRN2Q9H8L6 949 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 C17orf75Q9HAS0 396 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 POLD4Q9HCU8 107 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 ABHD10Q9NUJ1 306 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 ARMCX3Q9UH62 379 aaPredicted RBP7.41□□□□□ -1.22
SLIRP-204ENST00000555890 EXOC7Q9UPT5 735 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 PPP2R2CQ9Y2T4 447 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 ZNF236Q9UL36 1845 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 LAMA5O15230 3695 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 ANKRD62A6NC57 917 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 ASB14A6NK59 587 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 H0YCG3 227 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 K7ENM7 598 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 IPO7O95373 1038 aaKnown RBP7.4□□□□□ -1.22
SLIRP-204ENST00000555890 SCP2P22307 547 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 EDNRBP24530 442 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 HOXD13P35453 343 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 PSMC2P35998 433 aaKnown RBP7.4□□□□□ -1.22
SLIRP-204ENST00000555890 CLCN5P51795 746 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 RACK1P63244 317 aaKnown RBP7.4□□□□□ -1.22
SLIRP-204ENST00000555890 SP4Q02446 784 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 MAPK7Q13164 816 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 HIF1AQ16665 826 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 UGCGQ16739 394 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 ZC2HC1CQ53FD0 456 aaPredicted RBP7.4□□□□□ -1.22
SLIRP-204ENST00000555890 ZNF394Q53GI3 561 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 FAM102BQ5T8I3 360 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 FAM160B1Q5W0V3 765 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 CYFIP1Q7L576 1253 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 MAEAQ7L5Y9 396 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 OTOP2Q7RTS6 562 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 CACNA2D4Q7Z3S7 1137 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 HAUS6Q7Z4H7 955 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 KLHDC9Q8NEP7 349 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 SECISBP2LQ93073 1101 aaKnown RBP7.4□□□□□ -1.22
SLIRP-204ENST00000555890 HVCN1Q96D96 273 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 CEP170P1Q96L14 293 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 DNAJC7Q99615 494 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 ST6GALNAC4Q9H4F1 302 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 MLXIPQ9HAP2 919 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 ZNF302Q9NR11 478 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 NRBP2Q9NSY0 501 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 FRMD4BQ9Y2L6 1034 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 ASTN1O14525 1302 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 DNHD1Q96M86 4753 aa7.4□□□□□ -1.22
SLIRP-204ENST00000555890 NAV3Q8IVL0 2385 aa7.4□□□□□ -1.23
SLIRP-204ENST00000555890 SETD2Q9BYW2 2564 aaPredicted RBP7.4□□□□□ -1.23
SLIRP-204ENST00000555890 IGSF9BQ9UPX0 1349 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 DNAJC25-GNG10A0A024R161 153 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 LOC100996750A0A140TA64 210 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 USP27XA6NNY8 438 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 CLIC2O15247 247 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 TGFB1I1O43294 461 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 STRNO43815 780 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 AFPP02771 609 aaKnown RBP7.39□□□□□ -1.23
SLIRP-204ENST00000555890 PRB1P04280 392 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 PGK2P07205 417 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 ADORA2AP29274 412 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 CYLC1P35663 651 aaPredicted RBP7.39□□□□□ -1.23
SLIRP-204ENST00000555890 ACLYP53396 1101 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 NPEPPSP55786 919 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 PEX3P56589 373 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 KRT83P78385 493 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 CDK17Q00537 523 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 DMP1Q13316 513 aaPredicted RBP7.39□□□□□ -1.23
SLIRP-204ENST00000555890 HSP90AA2PQ14568 343 aaPredicted RBP7.39□□□□□ -1.23
SLIRP-204ENST00000555890 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.39□□□□□ -1.23
SLIRP-204ENST00000555890 UTP14CQ5TAP6 766 aaKnown RBP7.39□□□□□ -1.23
SLIRP-204ENST00000555890 ANO5Q75V66 913 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 SPRED2Q7Z698 418 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 REXO1L1PQ8IX06 675 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms