RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 UBXN2BQ14CS0 331 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 CNN3Q15417 329 aaKnown RBP4.23□□□□□ -1.73
SRP54-209ENST00000555746 CCDC157Q569K6 752 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 ATXN7L2Q5T6C5 722 aaPredicted RBP4.23□□□□□ -1.73
SRP54-209ENST00000555746 EMC10Q5UCC4 262 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 SWSAP1Q6NVH7 229 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 EFCAB12Q6NXP0 572 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 ZNF529Q6P280 563 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 ZNF808Q8N4W9 903 aaPredicted RBP4.23□□□□□ -1.73
SRP54-209ENST00000555746 FAM156AQ8NDB6 213 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 PJA1Q8NG27 643 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 TFAP2CQ92754 450 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 FAM89AQ96GI7 184 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 MRPL46Q9H2W6 279 aaKnown RBP4.23□□□□□ -1.73
SRP54-209ENST00000555746 ATP6V0A4Q9HBG4 840 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 GNL3LQ9NVN8 582 aaKnown RBP4.23□□□□□ -1.73
SRP54-209ENST00000555746 RLIMQ9NVW2 624 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 JKAMPQ9P055 326 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 ZDHHC8Q9ULC8 765 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 UTRNP46939 3433 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 SYNMO15061 1565 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 NWD1Q149M9 1564 aa4.23□□□□□ -1.73
SRP54-209ENST00000555746 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 ANO9A1A5B4 782 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 KLRG2A4D1S0 409 aaPredicted RBP4.22□□□□□ -1.73
SRP54-209ENST00000555746 CAPN14A8MX76 684 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 PHGDHO43175 533 aaKnown RBP4.22□□□□□ -1.73
SRP54-209ENST00000555746 HAUS5O94927 633 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 MATN4O95460 622 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 ACO1P21399 889 aaKnown RBP4.22□□□□□ -1.73
SRP54-209ENST00000555746 PIK3CGP48736 1102 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 KIF22Q14807 665 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 LLGL1Q15334 1064 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 SAFBQ15424 915 aaKnown RBP eCLIP4.22□□□□□ -1.73
SRP54-209ENST00000555746 MAP9Q49MG5 647 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 HS1BP3Q53T59 392 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 RNF220Q5VTB9 566 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 METRNLQ641Q3 311 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 DARS2Q6PI48 645 aaKnown RBP4.22□□□□□ -1.73
SRP54-209ENST00000555746 CCDC149Q6ZUS6 474 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 SGMS1Q86VZ5 419 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 PPP1R3BQ86XI6 285 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 PDSS2Q86YH6 399 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 BRIX1Q8TDN6 353 aaKnown RBP4.22□□□□□ -1.73
SRP54-209ENST00000555746 ATXN2LQ8WWM7 1075 aaKnown RBP4.22□□□□□ -1.73
SRP54-209ENST00000555746 MNTQ99583 582 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 BDH2Q9BUT1 245 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 C22orf23Q9BZE7 217 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 ZNF700Q9H0M5 742 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 BHMT2Q9H2M3 363 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 FBXO34Q9NWN3 711 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 XIRP1Q702N8 1843 aaKnown RBP4.22□□□□□ -1.73
SRP54-209ENST00000555746 ROBO1Q9Y6N7 1651 aa4.22□□□□□ -1.73
SRP54-209ENST00000555746 C9orf84Q5VXU9 1444 aa4.21□□□□□ -1.73
SRP54-209ENST00000555746 TCRBV7S2A1N4TA0A589 114 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 PRSS29PA6NIE9 313 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 DRGXA6NNA5 263 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 GOLGA6L6A8MZA4 724 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 GOLIM4O00461 696 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 KIAA0391O15091 583 aaKnown RBP4.21□□□□□ -1.74
SRP54-209ENST00000555746 ANXA1P04083 346 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 SELENOPP49908 381 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 RAP2BP61225 183 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 POLD3Q15054 466 aaPredicted RBP4.21□□□□□ -1.74
SRP54-209ENST00000555746 KIAA0753Q2KHM9 967 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 CCDC93Q567U6 631 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 ERICH6BQ5W0A0 696 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 APOA5Q6Q788 366 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 ZNF365Q70YC5 407 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 UBE3BQ7Z3V4 1068 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 C11orf96Q7Z7L8 435 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 SYT12Q8IV01 421 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 CCAR1Q8IX12 1150 aaKnown RBP4.21□□□□□ -1.74
SRP54-209ENST00000555746 GSPT2Q8IYD1 628 aaKnown RBP4.21□□□□□ -1.74
SRP54-209ENST00000555746 KRT78Q8N1N4 520 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 SH2D3CQ8N5H7 860 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 MB21D1Q8N884 522 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 OR10H5Q8NGA6 315 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 LRTOMTQ8WZ04 291 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 ANKS1AQ92625 1134 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 MRGPRX1Q96LB2 322 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 NT5C1BQ96P26 610 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 C1orf43Q9BWL3 253 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 PACSIN1Q9BY11 444 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 ARMT1Q9H993 441 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 ZMAT3Q9HA38 289 aaKnown RBP4.21□□□□□ -1.74
SRP54-209ENST00000555746 SPON1Q9HCB6 807 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 SARS2Q9NP81 518 aaKnown RBP4.21□□□□□ -1.74
SRP54-209ENST00000555746 SLC52A1Q9NWF4 448 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 PCDHA1Q9Y5I3 950 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 NEURL4Q96JN8 1562 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 PHLPP1O60346 1717 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 WRNQ14191 1432 aaPredicted RBP eCLIP4.21□□□□□ -1.74
SRP54-209ENST00000555746 FGD6Q6ZV73 1430 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 XDHP47989 1333 aa4.21□□□□□ -1.74
SRP54-209ENST00000555746 ABCA8O94911 1581 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 CEP170BQ9Y4F5 1589 aaPredicted RBP4.2□□□□□ -1.74
SRP54-209ENST00000555746 GRXCR1A8MXD5 290 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 DIRC3C9JPN6 131 aa4.2□□□□□ -1.74
SRP54-209ENST00000555746 PLIN1O60240 522 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms