RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 EIF3FO00303 357 aaPredicted RBP4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 PEX10O60683 326 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 TOX4O94842 621 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 NDST3O95803 873 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 A1BGP04217 495 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 VSIG10L2P0DP72 767 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 CKMT1AP12532 417 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 MYL4P12829 197 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 ZNF28P17035 718 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 TNFAIP3P21580 790 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 IL13P35225 146 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 MRE11P49959 708 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 ADCY7P51828 1080 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 IRX6P78412 446 aaPredicted RBP4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 TAF5Q15542 800 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 AFMIDQ63HM1 303 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 CBLL1Q75N03 491 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 RNF44Q7L0R7 432 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 KRT28Q7Z3Y7 464 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 ATG4DQ86TL0 474 aaPredicted RBP4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 ADGRG2Q8IZP9 1017 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 NUDT10Q8NFP7 164 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 MDM1Q8TC05 714 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 FAM71BQ8TC56 605 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 MZB1Q8WU39 189 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 LPPQ93052 612 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 NUDT11Q96G61 164 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 LTV1Q96GA3 475 aaPredicted RBP4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 CEP95Q96GE4 821 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 MYOCQ99972 504 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 GGA3Q9NZ52 723 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 MOCS1Q9NZB8 636 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 LRFN1Q9P244 771 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 NRBP1Q9UHY1 535 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 MBD1Q9UIS9 605 aaPredicted RBP4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 RUVBL1Q9Y265 456 aaKnown RBP4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 CRYL1Q9Y2S2 319 aa4.79□□□□□ -1.64
LSM6P2-201ENST00000552208 MYOCOSA0A1B0GUC4 107 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 TRIM38O00635 465 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 LDHCP07864 332 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 GJB1P08034 283 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 TXNP10599 105 aaKnown RBP4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 RARBP10826 455 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 MTHFD1P11586 935 aaKnown RBP4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 PFKLP17858 780 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 PHKA1P46020 1223 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 KCNJ5P48544 419 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 SLC11A2P49281 568 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 CARSP49589 748 aaKnown RBP4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 NOMO3P69849 1222 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 MPP1Q00013 466 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 HGFACQ04756 655 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 DUSP2Q05923 314 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 RAB32Q13637 225 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 FBXO47Q5MNV8 452 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 RETSATQ6NUM9 610 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 TRMT10BQ6PF06 316 aaKnown RBP4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 BORAQ6PGQ7 559 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 C1orf122Q6ZSJ8 110 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 ZNF605Q86T29 641 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 PDSS2Q86YH6 399 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 RTKN2Q8IZC4 609 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 ABI1Q8IZP0 508 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 SIMC1Q8NDZ2 872 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 SLC30A5Q8TAD4 765 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 OTUD7AQ8TE49 926 aaPredicted RBP4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 IPO4Q8TEX9 1081 aaKnown RBP4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 STYXQ8WUJ0 223 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 CFHR4Q92496 578 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 SLC7A6OSQ96CW6 309 aaPredicted RBP4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 AJUBAQ96IF1 538 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 ZSCAN31Q96LW9 406 aaPredicted RBP4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 NDC1Q9BTX1 674 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 GPR35Q9HC97 309 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 RGL1Q9NZL6 768 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 FAM30AQ9NZY2 134 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 JKAMPQ9P055 326 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 CFAP97Q9P2B7 532 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 CAPN11Q9UMQ6 739 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 SCAF8Q9UPN6 1271 aaKnown RBP4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 RBM8AQ9Y5S9 174 aaKnown RBP4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 ZMYM3Q14202 1370 aa4.78□□□□□ -1.64
LSM6P2-201ENST00000552208 TMEM233B4DJY2 109 aa4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 TISP43B9A030 160 aa4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 B9A039 149 aa4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 PODXLO00592 558 aa4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 IRAK2O43187 625 aa4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 FAM155BO75949 473 aa4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 JUNP05412 331 aaKnown RBP4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 BTF3P20290 206 aaKnown RBP4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 KLRC1P26715 233 aa4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 CASRP41180 1078 aa4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 COPAP53621 1224 aa4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 EIF5P55010 431 aaKnown RBP4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 TCF15Q12870 199 aa4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 DUSP8Q13202 625 aa4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 G3BP1Q13283 466 aaKnown RBP eCLIP4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 CNGB1Q14028 1251 aaPredicted RBP4.77□□□□□ -1.65
LSM6P2-201ENST00000552208 EFR3AQ14156 821 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms