RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 C11orf70Q9BRQ4 267 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 TRIM51Q9BSJ1 452 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 CISHQ9NSE2 258 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 GPR25O00155 361 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 PTGIRP43119 386 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 ZNF699Q32M78 642 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 SPRYD7Q5W111 196 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 DUPD1Q68J44 220 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 TMEM192Q8IY95 271 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 GOLGA6L1Q8N7Z2 621 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 MAGOHBQ96A72 148 aaKnown RBP14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 MAML3Q96JK9 1138 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 ERP44Q9BS26 406 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 XYLT2Q9H1B5 865 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 MRPL47Q9HD33 250 aaKnown RBP14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 PCYOX1Q9UHG3 505 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 MTUS1Q9ULD2 1270 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 AKT3Q9Y243 479 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 H3BRB1 525 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 PROSCO94903 275 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 CXCL8P10145 99 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 MCF2P10911 925 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 CD58P19256 250 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 TMOD1P28289 359 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 LMAN1P49257 510 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 TNFAIP2Q03169 654 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 PPFIA1Q13136 1202 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 MAMLD1Q13495 774 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 CYP1B1Q16678 543 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 DUSP28Q4G0W2 176 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 PLEKHA7Q6IQ23 1121 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 MTHFD1LQ6UB35 978 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 MMS22LQ6ZRQ5 1243 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 PLEKHH3Q7Z736 793 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 JAMLQ86YT9 394 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 CD302Q8IX05 232 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 C2orf69Q8N8R5 385 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 LRRC45Q96CN5 670 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 PARK7Q99497 189 aaKnown RBP14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 PTPN18Q99952 460 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 PLVAPQ9BX97 442 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 DPH5Q9H2P9 285 aa14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 TUT1Q9H6E5 874 aaKnown RBP14.93□□□□□ -0.02
RAB3IP-216ENST00000552199 TCRBV7S2A1N4TA0A589 114 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 FSCN2O14926 492 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 CSDE1O75534 798 aaKnown RBP14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 VTNP04004 478 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 STAG3L1P0CL83 205 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 SMPD1P17405 629 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 SIX1Q15475 284 aaPredicted RBP14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 KCTD19Q17RG1 926 aaPredicted RBP14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 C18orf8Q96DM3 657 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 PDZD7Q9H5P4 517 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 RASAL2Q9UJF2 1139 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 SCINQ9Y6U3 715 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 GOLGA6CA6NDK9 693 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 LACTBL1A8MY62 500 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 ZEB2O60315 1214 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 LSM8O95777 96 aaKnown RBP14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 WEE2P0C1S8 567 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 GOLGA6DP0CG33 693 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 RARAP10276 462 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 HOXD8P13378 290 aaPredicted RBP14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 MMP8P22894 467 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 ASPAP45381 313 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 DRG2P55039 364 aaKnown RBP14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 ACVR2BQ13705 512 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 FAM110CQ1W6H9 321 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 IQSEC1Q6DN90 963 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 TTC27Q6P3X3 843 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 ARL8AQ96BM9 186 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 RUNDC3BQ96NL0 473 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 PPP1R16BQ96T49 567 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 TINF2Q9BSI4 451 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 TRIM31Q9BZY9 425 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 ABHD16BQ9H3Z7 469 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 GOLGA6AQ9NYA3 693 aa14.92□□□□□ -0.02
RAB3IP-216ENST00000552199 MMP3P08254 477 aa14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 BRD2P25440 801 aaKnown RBP14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 FLT3P36888 993 aa14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 HSD17B3P37058 310 aa14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 COILP38432 576 aaPredicted RBP14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 YWHAEP62258 255 aaKnown RBP14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 CCDC137Q6PK04 289 aaKnown RBP14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 SCARA5Q6ZMJ2 495 aa14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 C12orf50Q8NA57 414 aaPredicted RBP14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 OR6J1Q8NGC5 347 aa14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 FAM76AQ8TAV0 307 aa14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 DDX27Q96GQ7 796 aaKnown RBP14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 CPB2Q96IY4 423 aa14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 PARVAQ9NVD7 372 aa14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 SIX4Q9UIU6 781 aa14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.91□□□□□ -0.02
RAB3IP-216ENST00000552199 SLC15A5A6NIM6 579 aa14.9□□□□□ -0.02
RAB3IP-216ENST00000552199 PODXLO00592 558 aa14.9□□□□□ -0.02
RAB3IP-216ENST00000552199 MEFVO15553 781 aaPredicted RBP14.9□□□□□ -0.02
RAB3IP-216ENST00000552199 CELF2O95319 508 aaKnown RBP14.9□□□□□ -0.02
RAB3IP-216ENST00000552199 NFICP08651 508 aa14.9□□□□□ -0.02
RAB3IP-216ENST00000552199 ARF4P18085 180 aaPredicted RBP14.9□□□□□ -0.02
RAB3IP-216ENST00000552199 GRIK4Q16099 956 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms