RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 DENND4AQ7Z401 1863 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 UBE4BO95155 1302 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 PTPRJQ12913 1337 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 WDR27A2RRH5 827 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 PI4K2BG5E9Z4 385 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 M0QZQ0 153 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 ITGB3P05106 788 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 OR4Q2P0C623 313 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 CPB1P15086 417 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 POLR2BP30876 1174 aaKnown RBP17.06■□□□□ 0.32
DDX54-205ENST00000548786 NTHL1P78549 312 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 YWHAHQ04917 246 aaPredicted RBP17.06■□□□□ 0.32
DDX54-205ENST00000548786 C15orf39Q6ZRI6 1047 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 HS2ST1Q7LGA3 356 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 USP37Q86T82 979 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 CMASQ8NFW8 434 aaPredicted RBP17.06■□□□□ 0.32
DDX54-205ENST00000548786 HDAC7Q8WUI4 952 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 SENP8Q96LD8 212 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 PRKD2Q9BZL6 878 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 MTMR12Q9C0I1 747 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 ZDHHC7Q9NXF8 308 aa17.06■□□□□ 0.32
DDX54-205ENST00000548786 CLUHO75153 1309 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 SCN1AP35498 2009 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 ANO9A1A5B4 782 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 ZNF233A6NK53 670 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 PIRO00625 290 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 ASGR2P07307 311 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 KRT19P08727 400 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 ODC1P11926 461 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 AARSP49588 968 aaKnown RBP eCLIP17.05■□□□□ 0.32
DDX54-205ENST00000548786 MRPL58Q14197 206 aaKnown RBP17.05■□□□□ 0.32
DDX54-205ENST00000548786 KNOP1Q1ED39 458 aaKnown RBP17.05■□□□□ 0.32
DDX54-205ENST00000548786 SLC8B1Q6J4K2 584 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 GET4Q7L5D6 327 aaPredicted RBP17.05■□□□□ 0.32
DDX54-205ENST00000548786 GRASPQ7Z6J2 395 aaPredicted RBP17.05■□□□□ 0.32
DDX54-205ENST00000548786 C1orf127Q8N9H9 656 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 ST13P5Q8NFI4 369 aaPredicted RBP17.05■□□□□ 0.32
DDX54-205ENST00000548786 PGLYRP2Q96PD5 576 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 LIMD1Q9UGP4 676 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 AGAP1Q9UPQ3 857 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 MAPK8IP1Q9UQF2 711 aa17.05■□□□□ 0.32
DDX54-205ENST00000548786 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.05■□□□□ 0.32
DDX54-205ENST00000548786 PRRG1O14668 218 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 TBC1D4O60343 1298 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 N4BP1O75113 896 aaKnown RBP17.04■□□□□ 0.32
DDX54-205ENST00000548786 TMEM191BP0C7N4 346 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 DLATP10515 647 aaKnown RBP17.04■□□□□ 0.32
DDX54-205ENST00000548786 ALADP13716 330 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 GBP2P32456 591 aaPredicted RBP17.04■□□□□ 0.32
DDX54-205ENST00000548786 ELF1P32519 619 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 TAF6P49848 677 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 DPYDQ12882 1025 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 BFSP1Q12934 665 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 SNRNP35Q16560 246 aaKnown RBP17.04■□□□□ 0.32
DDX54-205ENST00000548786 BMT2Q1RMZ1 405 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 OVOS1Q6IE37 1185 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 CSGALNACT2Q8N6G5 542 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 OR5B17Q8NGF7 314 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 ZNF461Q8TAF7 563 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 CCDC127Q96BQ5 260 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 TMEM209Q96SK2 561 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 CYP4F11Q9HBI6 524 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 WDR6Q9NNW5 1121 aaKnown RBP17.04■□□□□ 0.32
DDX54-205ENST00000548786 HCFC1R1Q9NWW0 138 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 TSC2P49815 1807 aa17.04■□□□□ 0.32
DDX54-205ENST00000548786 CYB561D2O14569 222 aa17.03■□□□□ 0.32
DDX54-205ENST00000548786 KIAA0391O15091 583 aaKnown RBP17.03■□□□□ 0.32
DDX54-205ENST00000548786 SEC24AO95486 1093 aa17.03■□□□□ 0.32
DDX54-205ENST00000548786 POU5F1Q01860 360 aaKnown RBP17.03■□□□□ 0.32
DDX54-205ENST00000548786 ADCY1Q08828 1119 aa17.03■□□□□ 0.32
DDX54-205ENST00000548786 PNOCQ13519 176 aa17.03■□□□□ 0.32
DDX54-205ENST00000548786 RNF19BQ6ZMZ0 732 aa17.03■□□□□ 0.32
DDX54-205ENST00000548786 XXYLT1Q8NBI6 393 aa17.03■□□□□ 0.32
DDX54-205ENST00000548786 CACTINQ8WUQ7 758 aaKnown RBP17.03■□□□□ 0.32
DDX54-205ENST00000548786 ERCC4Q92889 916 aaPredicted RBP17.03■□□□□ 0.32
DDX54-205ENST00000548786 CCDC47Q96A33 483 aaKnown RBP17.03■□□□□ 0.32
DDX54-205ENST00000548786 C1QTNF1Q9BXJ1 281 aa17.03■□□□□ 0.32
DDX54-205ENST00000548786 SMOC2Q9H3U7 446 aa17.03■□□□□ 0.32
DDX54-205ENST00000548786 C11orf16Q9NQ32 467 aa17.03■□□□□ 0.32
DDX54-205ENST00000548786 EXOC3O60645 756 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 XYLBO75191 536 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 ABLIM3O94929 683 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 C1RP00736 705 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 MYL1P05976 194 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 HNRNPA1P09651 372 aaKnown RBP eCLIP17.02■□□□□ 0.32
DDX54-205ENST00000548786 ANP32AP39687 249 aaKnown RBP17.02■□□□□ 0.32
DDX54-205ENST00000548786 PSMD2Q13200 908 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 SV2CQ496J9 727 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 TMEM31Q5JXX7 168 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 WSCD1Q658N2 575 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 OTOP3Q7RTS5 596 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 NT5DC4Q86YG4 428 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 FMR1NBQ8N0W7 255 aaPredicted RBP17.02■□□□□ 0.32
DDX54-205ENST00000548786 ACSF2Q96CM8 615 aaPredicted RBP17.02■□□□□ 0.32
DDX54-205ENST00000548786 ANKRD36BP1Q96IX9 119 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 ZNF560Q96MR9 790 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 MYADMQ96S97 322 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 SIX4Q9UIU6 781 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 DOCK6Q96HP0 2047 aa17.02■□□□□ 0.32
DDX54-205ENST00000548786 KPNA7A9QM74 516 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms