RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 MTHFSDQ2M296 383 aaKnown RBP4.09□□□□□ -1.75
CUL3-215ENST00000546102 ALDH1L2Q3SY69 923 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 MZT2AQ6P582 158 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 ZNF530Q6P9A1 599 aaPredicted RBP4.09□□□□□ -1.75
CUL3-215ENST00000546102 UNQ6494/PRO21346Q6UXR6 183 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 MCM10Q7L590 875 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 RTN4RL1Q86UN2 441 aaPredicted RBP4.09□□□□□ -1.75
CUL3-215ENST00000546102 RIOX2Q8IUF8 465 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 LYSMD2Q8IV50 215 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 TMEFF1Q8IYR6 380 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 SYT8Q8NBV8 401 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 NUP43Q8NFH3 380 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 PLBD2Q8NHP8 589 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 ASB15Q8WXK1 588 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 DPF2Q92785 391 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 FRAT1Q92837 279 aaPredicted RBP4.09□□□□□ -1.75
CUL3-215ENST00000546102 RGMAQ96B86 450 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 FOXRED1Q96CU9 486 aaPredicted RBP4.09□□□□□ -1.75
CUL3-215ENST00000546102 APIPQ96GX9 242 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 MAML3Q96JK9 1138 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 TBATAQ96M53 351 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 JMJD8Q96S16 334 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 LRRC27Q9C0I9 530 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 WNT8AQ9H1J5 351 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 ZMAT3Q9HA38 289 aaKnown RBP4.09□□□□□ -1.75
CUL3-215ENST00000546102 STARD7Q9NQZ5 370 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 USP40Q9NVE5 1235 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 FBLN5Q9UBX5 448 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 PGAP2Q9UHJ9 254 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 TSPYL4Q9UJ04 414 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 TPCN1Q9ULQ1 816 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 MAGED2Q9UNF1 606 aaPredicted RBP4.09□□□□□ -1.75
CUL3-215ENST00000546102 NUMBLQ9Y6R0 609 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 PCDH11XQ9BZA7 1347 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 PCDH11YQ9BZA8 1340 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 CEMIPQ8WUJ3 1361 aa4.09□□□□□ -1.75
CUL3-215ENST00000546102 KDM3BQ7LBC6 1761 aa4.09□□□□□ -1.76
CUL3-215ENST00000546102 A0A1W2PQ45 241 aaPredicted RBP4.08□□□□□ -1.76
CUL3-215ENST00000546102 A0A1W2PQY0 241 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 PRAMEF22A3QJZ6 481 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 DDX3XO00571 662 aaKnown RBP eCLIP4.08□□□□□ -1.76
CUL3-215ENST00000546102 TIMM44O43615 452 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 SIPA1L3O60292 1781 aaPredicted RBP4.08□□□□□ -1.76
CUL3-215ENST00000546102 MAFKO60675 156 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 RNASEH2AO75792 299 aaKnown RBP4.08□□□□□ -1.76
CUL3-215ENST00000546102 NTRK1P04629 796 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 PYGLP06737 847 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 ZNF853P0CG23 659 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 PRKCAP17252 672 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 TACR1P25103 407 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 EPHA5P54756 1037 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 GPSM2P81274 684 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 SLC6A3Q01959 620 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 GRIN1Q05586 938 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 ADCY2Q08462 1091 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 TEFQ10587 303 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 MALLQ13021 153 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 PPFIA1Q13136 1202 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 TBX2Q13207 712 aaPredicted RBP4.08□□□□□ -1.76
CUL3-215ENST00000546102 STARD3Q14849 445 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 NR1I3Q14994 352 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 CHRNA2Q15822 529 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 ZNF827Q17R98 1081 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 TWISTNBQ3B726 338 aaPredicted RBP4.08□□□□□ -1.76
CUL3-215ENST00000546102 PRR16Q569H4 304 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 EMC4Q5J8M3 183 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 HYIQ5T013 277 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 UBXN11Q5T124 520 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 PRAMEF18Q5VWM3 479 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 ZKSCAN2Q63HK3 967 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 VIRMAQ69YN4 1812 aaKnown RBP4.08□□□□□ -1.76
CUL3-215ENST00000546102 KIAA1841Q6NSI8 718 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 ZC3H14Q6PJT7 736 aaKnown RBP4.08□□□□□ -1.76
CUL3-215ENST00000546102 TOM1L2Q6ZVM7 507 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 NRAPQ86VF7 1730 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 SYTL1Q8IYJ3 562 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 CCDC33Q8N5R6 958 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 LZTR1Q8N653 840 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 NSUN6Q8TEA1 469 aaKnown RBP4.08□□□□□ -1.76
CUL3-215ENST00000546102 HDAC10Q969S8 669 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 ARL8AQ96BM9 186 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 TBC1D20Q96BZ9 403 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 CDK5RAP3Q96JB5 506 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 PLCD4Q9BRC7 762 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 THUMPD2Q9BTF0 503 aaKnown RBP4.08□□□□□ -1.76
CUL3-215ENST00000546102 CHMP4BQ9H444 224 aaKnown RBP4.08□□□□□ -1.76
CUL3-215ENST00000546102 ATP6V0A4Q9HBG4 840 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 EPB41L4AQ9HCS5 686 aaPredicted RBP4.08□□□□□ -1.76
CUL3-215ENST00000546102 JCADQ9P266 1359 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 KLHL14Q9P2G3 628 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 MYOTQ9UBF9 498 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 PRSS50Q9UI38 385 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 USP18Q9UMW8 372 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 PCDHA13Q9Y5I0 950 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 LRRFIP2Q9Y608 721 aaKnown RBP4.08□□□□□ -1.76
CUL3-215ENST00000546102 CDY2AQ9Y6F7 541 aa4.08□□□□□ -1.76
CUL3-215ENST00000546102 N4BP2Q86UW6 1770 aaPredicted RBP4.07□□□□□ -1.76
CUL3-215ENST00000546102 SCN11AQ9UI33 1791 aa4.07□□□□□ -1.76
CUL3-215ENST00000546102 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.07□□□□□ -1.76
CUL3-215ENST00000546102 LRP6O75581 1613 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms