RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	GALE	Q14376	348 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	PUM1	Q14671	1186 aa	Known RBP eCLIP	6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	ZXDC	Q2QGD7	858 aa	Predicted RBP	6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	SWSAP1	Q6NVH7	229 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	KIAA0319L	Q8IZA0	1049 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	SLC17A8	Q8NDX2	589 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	PNKP	Q96T60	521 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	ZNF747	Q9BV97	191 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	IMPG2	Q9BZV3	1241 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	FAM204A	Q9H8W3	233 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	SARS2	Q9NP81	518 aa	Known RBP	6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	SLC2A4RG	Q9NR83	387 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	GPRC5B	Q9NZH0	403 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	CPA4	Q9UI42	421 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	MAP3K2	Q9Y2U5	619 aa		6.65	□□□□□ -1.34
LEMD3-205	ENST00000544506	CAPN8	A6NHC0	703 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506		E9PLN8	166 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	GPANK1	O95872	356 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	CFI	P05156	583 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	HDC	P19113	662 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	TNFRSF1A	P19438	455 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	USP14	P54578	494 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	SOX8	P57073	446 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	BEAN1	Q3B7T3	259 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	LSM12	Q3MHD2	195 aa	Known RBP	6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	KHDC1L	Q5JSQ8	128 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	B3GNTL1	Q67FW5	361 aa	Predicted RBP	6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	CHST15	Q7LFX5	561 aa	Predicted RBP	6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	DGKH	Q86XP1	1220 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	PDPR	Q8NCN5	879 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	SCAMP4	Q969E2	229 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	TIFA	Q96CG3	184 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	VKORC1	Q9BQB6	163 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	ZNF341	Q9BYN7	854 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	ZMAT3	Q9HA38	289 aa	Known RBP	6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	GPR35	Q9HC97	309 aa		6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	6.64	□□□□□ -1.35
LEMD3-205	ENST00000544506	TPP1	O14773	563 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	NDUFA10	O95299	355 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	LAG3	P18627	525 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	ZNF135	P52742	658 aa	Predicted RBP	6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	GPSM2	P81274	684 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	CNN3	Q15417	329 aa	Known RBP	6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	CRB2	Q5IJ48	1285 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	EMC10	Q5UCC4	262 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	FNDC7	Q5VTL7	733 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	MAEA	Q7L5Y9	396 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	TMEM132C	Q8N3T6	1108 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	FAM156A	Q8NDB6	213 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	CPEB3	Q8NE35	698 aa	Known RBP	6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	MRGPRX1	Q96LB2	322 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	NRDE2	Q9H7Z3	1164 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	RSAD1	Q9HA92	442 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	ATP6V0A4	Q9HBG4	840 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	CNNM1	Q9NRU3	951 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	VSX1	Q9NZR4	365 aa	Predicted RBP	6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	AGAP1	Q9UPQ3	857 aa		6.63	□□□□□ -1.35
LEMD3-205	ENST00000544506	ERN1	O75460	977 aa	Known RBP	6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	ZBED1	O96006	694 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	GNAI2	P04899	355 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	NPR1	P16066	1061 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	PTGS2	P35354	604 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	CYB5RL	Q6IPT4	315 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	FOXR2	Q6PJQ5	311 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	CCDC149	Q6ZUS6	474 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	RHOU	Q7L0Q8	258 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	SRGAP1	Q7Z6B7	1085 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	GGN	Q86UU5	652 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	CFAP52	Q8N1V2	620 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	SYNE4	Q8N205	404 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	ZNF483	Q8TF39	744 aa	Predicted RBP	6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	MYEOV	Q96EZ4	313 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	ADAM2	Q99965	735 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	TINAGL1	Q9GZM7	467 aa	Predicted RBP	6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	RNF181	Q9P0P0	153 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	DKK2	Q9UBU2	259 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	KCNE5	Q9UJ90	142 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	L1RE1	Q9UN81	338 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	FZD1	Q9UP38	647 aa		6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506	REXO2	Q9Y3B8	237 aa	Known RBP	6.62	□□□□□ -1.35
LEMD3-205	ENST00000544506		A0A1W2PPL8	197 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	KIF3B	O15066	747 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	PHGDH	O43175	533 aa	Known RBP	6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	LPXN	O60711	386 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	ZFPL1	O95159	310 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	CHEK2	O96017	543 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	HLA-DOA	P06340	250 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	CXADR	P78310	365 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	REST	Q13127	1097 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	TIGD2	Q4W5G0	525 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	IGFL4	Q6B9Z1	124 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	CRIP3	Q6Q6R5	217 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	PCSK9	Q8NBP7	692 aa	Known RBP	6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	NSUN7	Q8NE18	718 aa	Known RBP	6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	HAS1	Q92839	578 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	LENG9	Q96B70	501 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	RNF31	Q96EP0	1072 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	MED15	Q96RN5	788 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	C22orf23	Q9BZE7	217 aa		6.61	□□□□□ -1.35

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