RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-229ENST00000540643 BNIPLQ7Z465 357 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 USP38Q8NB14 1042 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 MINDY2Q8NBR6 621 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 KRT35Q92764 455 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 DDX17Q92841 729 aaKnown RBP13.6□□□□□ -0.23
SFI1-229ENST00000540643 TMEM79Q9BSE2 394 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 WDR70Q9NW82 654 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 ZNF224Q9NZL3 707 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 PRKAG3Q9UGI9 489 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 E7EWF7 191 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 BMP10O95393 424 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 MSLNQ13421 630 aaPredicted RBP13.6□□□□□ -0.23
SFI1-229ENST00000540643 PARP6Q2NL67 630 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 KIAA1755Q5JYT7 1200 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 PPM1LQ5SGD2 360 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 ALKBH5Q6P6C2 394 aaKnown RBP13.6□□□□□ -0.23
SFI1-229ENST00000540643 NECAB2Q7Z6G3 386 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 RAVER1Q8IY67 606 aaKnown RBP13.6□□□□□ -0.23
SFI1-229ENST00000540643 RHOBTB2Q9BYZ6 727 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 SAYSD1Q9NPB0 183 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 MRPS7Q9Y2R9 242 aaKnown RBP13.6□□□□□ -0.23
SFI1-229ENST00000540643 WDR47O94967 919 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 IDO1P14902 403 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 TOB2Q14106 344 aaPredicted RBP13.6□□□□□ -0.23
SFI1-229ENST00000540643 BBS9Q3SYG4 887 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 EFHC1Q5JVL4 640 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 LDLRAP1Q5SW96 308 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 GRK7Q8WTQ7 553 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 C9orf72Q96LT7 481 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 ZKSCAN3Q9BRR0 538 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 LIN28AQ9H9Z2 209 aaKnown RBP13.6□□□□□ -0.23
SFI1-229ENST00000540643 J3QRK9 145 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 CALM1P0DP23 149 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 CALM2P0DP24 149 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 CALM3P0DP25 149 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 IL32P24001 234 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 NECTIN1Q15223 517 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 KCTD19Q17RG1 926 aaPredicted RBP13.6□□□□□ -0.23
SFI1-229ENST00000540643 TTI2Q6NXR4 508 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 PHC2Q8IXK0 858 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 SPERTQ8NA61 448 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 C1orf131Q8NDD1 294 aaKnown RBP13.6□□□□□ -0.23
SFI1-229ENST00000540643 FBXL8Q96CD0 374 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 VPS35Q96QK1 796 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 FARSBQ9NSD9 589 aaKnown RBP13.6□□□□□ -0.23
SFI1-229ENST00000540643 FAM8A1Q9UBU6 413 aa13.6□□□□□ -0.23
SFI1-229ENST00000540643 ZNF806P0C7X5 589 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 CABP4P57796 275 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 OCRLQ01968 901 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 ATXN2LQ8WWM7 1075 aaKnown RBP13.59□□□□□ -0.23
SFI1-229ENST00000540643 EFHD2Q96C19 240 aaPredicted RBP13.59□□□□□ -0.23
SFI1-229ENST00000540643 XAGE2Q96GT9 111 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 MTMR9Q96QG7 549 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 SRPK1Q96SB4 655 aaKnown RBP13.59□□□□□ -0.23
SFI1-229ENST00000540643 STAP2Q9UGK3 403 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 SESN1Q9Y6P5 492 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 PREX1Q8TCU6 1659 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 A0A1W2PRG6 482 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 PEX11AO75192 247 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 PGS1Q32NB8 556 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 GPR107Q5VW38 600 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 SHC4Q6S5L8 630 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 PIK3AP1Q6ZUJ8 805 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 SPATA18Q8TC71 538 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 KCNK16Q96T55 309 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 DNAJC5Q9H3Z4 198 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 FAIMQ9NVQ4 179 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 ARMCX1Q9P291 453 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 TUBE1Q9UJT0 475 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 APOL1O14791 398 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 NPPAP01160 153 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 RAG1P15918 1043 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 ANXA13P27216 316 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 FOLH1Q04609 750 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 KLHDC10Q6PID8 442 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 MFSD6Q6ZSS7 791 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 CENPUQ71F23 418 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 GRAMD2AQ8IUY3 354 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 CD302Q8IX05 232 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 MAGEB18Q96M61 343 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 C1orf50Q9BV19 199 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 COG4Q9H9E3 785 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 ANGEL1Q9UNK9 670 aaKnown RBP13.59□□□□□ -0.23
SFI1-229ENST00000540643 MYRFQ9Y2G1 1151 aa13.59□□□□□ -0.23
SFI1-229ENST00000540643 AXIN1O15169 862 aa13.58□□□□□ -0.24
SFI1-229ENST00000540643 VCLP18206 1134 aa13.58□□□□□ -0.24
SFI1-229ENST00000540643 SOX5P35711 763 aa13.58□□□□□ -0.24
SFI1-229ENST00000540643 CLK1P49759 484 aaKnown RBP13.58□□□□□ -0.24
SFI1-229ENST00000540643 CENPCQ03188 943 aa13.58□□□□□ -0.24
SFI1-229ENST00000540643 NR1H3Q13133 447 aa13.58□□□□□ -0.24
SFI1-229ENST00000540643 EFTUD2Q15029 972 aaKnown RBP eCLIP13.58□□□□□ -0.245e-7■■■■□ 19.7
SFI1-229ENST00000540643 PLA2G4EQ3MJ16 856 aa13.58□□□□□ -0.24
SFI1-229ENST00000540643 ZFP69Q49AA0 526 aa13.58□□□□□ -0.24
SFI1-229ENST00000540643 LPCAT4Q643R3 524 aa13.58□□□□□ -0.24
SFI1-229ENST00000540643 RNF207Q6ZRF8 634 aa13.58□□□□□ -0.24
SFI1-229ENST00000540643 SLC22A8Q8TCC7 542 aa13.58□□□□□ -0.24
SFI1-229ENST00000540643 GLG1Q92896 1179 aa13.58□□□□□ -0.24
SFI1-229ENST00000540643 GPRC5DQ9NZD1 345 aa13.58□□□□□ -0.24
SFI1-229ENST00000540643 MTO1Q9Y2Z2 717 aaKnown RBP13.58□□□□□ -0.24
SFI1-229ENST00000540643 WASF2Q9Y6W5 498 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms