RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 KYAT1Q16773 422 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 ZNF569Q5MCW4 686 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 CATSPER4Q7RTX7 472 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 ZBTB33Q86T24 672 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 CTAGE6Q86UF2 777 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 CDR2LQ86X02 465 aaPredicted RBP9.48□□□□□ -0.89
DDB1-213ENST00000539332 GPIHBP1Q8IV16 184 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 CTAGE4Q8IX94 777 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 FAM126BQ8IXS8 530 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 ANKLE1Q8NAG6 615 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 TET1Q8NFU7 2136 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 OR5B17Q8NGF7 314 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 LNX1Q8TBB1 728 aaPredicted RBP9.48□□□□□ -0.89
DDB1-213ENST00000539332 MICAL1Q8TDZ2 1067 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 DIS3LQ8TF46 1054 aaKnown RBP9.48□□□□□ -0.89
DDB1-213ENST00000539332 KAT5Q92993 513 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 CPB2Q96IY4 423 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 MYCBPQ99417 103 aaPredicted RBP9.48□□□□□ -0.89
DDB1-213ENST00000539332 NCAPGQ9BPX3 1015 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 MCOLN1Q9GZU1 580 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 ADAMTS1Q9UHI8 967 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 TFR2Q9UP52 801 aa9.48□□□□□ -0.89
DDB1-213ENST00000539332 A0A087WUV0 522 aaPredicted RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 ANO9A1A5B4 782 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 A6NNZ2 444 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 MEFVO15553 781 aaPredicted RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 CAND2O75155 1236 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 HARSP12081 509 aaKnown RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 TNNI1P19237 187 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 HOXA11P31270 313 aaPredicted RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 ATN1P54259 1190 aaPredicted RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 AMPD2Q01433 879 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 ARHGAP44Q17R89 818 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 TUBB8Q3ZCM7 444 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 DNAJC21Q5F1R6 531 aaKnown RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 FAM26DQ5JW98 314 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 SWT1Q5T5J6 900 aaKnown RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 LMBRD2Q68DH5 695 aaPredicted RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 ALKBH5Q6P6C2 394 aaKnown RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 VPS36Q86VN1 386 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 PPM1KQ8N3J5 372 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 RNF10Q8N5U6 811 aaKnown RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 UBR7Q8N806 425 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 FAM84AQ96KN4 292 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 RPGRIP1Q96KN7 1286 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 NAPGQ99747 312 aaPredicted RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 TMEM106CQ9BVX2 250 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 ANKZF1Q9H8Y5 726 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 C1orf112Q9NSG2 853 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 LCMT1Q9UIC8 334 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 SALL4Q9UJQ4 1053 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 NOCTQ9UK39 431 aaKnown RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 GUCA1BQ9UMX6 200 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 CNTN6Q9UQ52 1028 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 NOC2LQ9Y3T9 749 aaKnown RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 DUSP10Q9Y6W6 482 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 NCANO14594 1321 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 MROH7Q68CQ1 1323 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 PQBP1O60828 265 aaKnown RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 ASS1P00966 412 aaKnown RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 CD4P01730 458 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 CLTAP09496 248 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 CKBP12277 381 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 PIK3CAP42336 1068 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 CASP8Q14790 479 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 DCAF4L1Q3SXM0 396 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 SEZ6Q53EL9 994 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 ZNF618Q5T7W0 954 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 SLC39A5Q6ZMH5 540 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 ANKRD33Q7Z3H0 272 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 CCDC91Q7Z6B0 441 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 FAM228AQ86W67 206 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 CEP120Q8N960 986 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 EPS8L1Q8TE68 723 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 SECISBP2LQ93073 1101 aaKnown RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 TATDN2Q93075 761 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 MRRFQ96E11 262 aaKnown RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 APOBEC3GQ9HC16 384 aaKnown RBP9.47□□□□□ -0.89
DDB1-213ENST00000539332 TANC1Q9C0D5 1861 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 SCN5AQ14524 2016 aa9.47□□□□□ -0.89
DDB1-213ENST00000539332 CEP290O15078 2479 aa9.46□□□□□ -0.89
DDB1-213ENST00000539332 A0A0A6YYK5 440 aaPredicted RBP9.46□□□□□ -0.9
DDB1-213ENST00000539332 ACO1P21399 889 aaKnown RBP9.46□□□□□ -0.9
DDB1-213ENST00000539332 AXLP30530 894 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 NOP14P78316 857 aaKnown RBP9.46□□□□□ -0.9
DDB1-213ENST00000539332 NCOA4Q13772 614 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 FBXO47Q5MNV8 452 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 C1orf53Q5VUE5 145 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 PAPD7Q5XG87 772 aaKnown RBP9.46□□□□□ -0.9
DDB1-213ENST00000539332 NOTUMQ6P988 496 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 TRAF7Q6Q0C0 670 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 MMS22LQ6ZRQ5 1243 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 TRAPPC11Q7Z392 1133 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 TMEM192Q8IY95 271 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 THNSL1Q8IYQ7 743 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 TRIM58Q8NG06 486 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 CAGE1Q8TC20 777 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 RUBCNQ92622 972 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 FAXDC2Q96IV6 333 aa9.46□□□□□ -0.9
DDB1-213ENST00000539332 PAWRQ96IZ0 340 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms