RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 UMODL1Q5DID0 1318 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 EXOC1LA0A1B0GW35 172 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 A6NHS1 94 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 TRAFD1O14545 582 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-218ENST00000537641 LMNAP02545 664 aaKnown RBP12.88□□□□□ -0.35
CPSF7-218ENST00000537641 RALAP11233 206 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 CETN2P41208 172 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 PTGER2P43116 358 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 QARSP47897 775 aaKnown RBP12.88□□□□□ -0.35
CPSF7-218ENST00000537641 HSD17B4P51659 736 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 BPIFB4P59827 614 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 UBXN2AP68543 259 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 TRIM72Q6ZMU5 477 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 FAM47EQ6ZV65 393 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 MAEAQ7L5Y9 396 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 ANKS1BQ7Z6G8 1248 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 CBWD2Q8IUF1 395 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 ZSWIM2Q8NEG5 633 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 EXD1Q8NHP7 514 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 FBXO41Q8TF61 875 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 SLC16A10Q8TF71 515 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 STK32AQ8WU08 396 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 C10orf82Q8WW14 230 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 MFSD14AQ96MC6 490 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 LRRC37BQ96QE4 947 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 RBM15Q96T37 977 aaKnown RBP eCLIP12.88□□□□□ -0.35
CPSF7-218ENST00000537641 OSBPL8Q9BZF1 889 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 TRABDQ9H4I3 376 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 LRRC42Q9Y546 428 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 ZHX2Q9Y6X8 837 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 MYPNQ86TC9 1320 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 GOLGA8IPA6NC78 632 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 GOLGA8JA6NMD2 632 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 FOXO6A8MYZ6 492 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-218ENST00000537641 CYP1A1P04798 512 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-218ENST00000537641 ICAM1P05362 532 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 GCAP28676 217 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 GCKP35557 465 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 VPS41P49754 854 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 LIN9Q5TKA1 542 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 DRICH1Q6PGQ1 229 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-218ENST00000537641 LMNTD2Q8IXW0 634 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 LRRC8CQ8TDW0 803 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 FBXL18Q96ME1 805 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 SMC6Q96SB8 1091 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 TLE6Q9H808 572 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 FBXO28Q9NVF7 368 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-218ENST00000537641 SLC24A2Q9UI40 661 aa12.87□□□□□ -0.35
CPSF7-218ENST00000537641 BRCA1P38398 1863 aaKnown RBP12.87□□□□□ -0.35
CPSF7-218ENST00000537641 DDX39AO00148 427 aaKnown RBP12.86□□□□□ -0.35
CPSF7-218ENST00000537641 WNT10BO00744 389 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 SLC16A4O15374 487 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 KRT5P13647 590 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 NSFP46459 744 aaKnown RBP12.86□□□□□ -0.35
CPSF7-218ENST00000537641 PEX3P56589 373 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 CXCL9Q07325 125 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 DNAJC3Q13217 504 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 CCDC142Q17RM4 750 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 SLC45A4Q5BKX6 768 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 SEPT14Q6ZU15 432 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 MON1BQ7L1V2 547 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 C4orf19Q8IY42 314 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 FAM13CQ8NE31 585 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 TAS1R2Q8TE23 839 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 SAAL1Q96ER3 474 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 VCPIP1Q96JH7 1222 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 PWWP2AQ96N64 755 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 GLIS2Q9BZE0 524 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-218ENST00000537641 PHACTR1Q9C0D0 580 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 KIAA1586Q9HCI6 787 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 MRPL47Q9HD33 250 aaKnown RBP12.86□□□□□ -0.35
CPSF7-218ENST00000537641 SAYSD1Q9NPB0 183 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 SAR1AQ9NR31 198 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 ZFATQ9P243 1243 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 FETUBQ9UGM5 382 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 LNPEPQ9UIQ6 1025 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 TBX20Q9UMR3 447 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 SCINQ9Y6U3 715 aa12.86□□□□□ -0.35
CPSF7-218ENST00000537641 C2CD2LO14523 706 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 WDR46O15213 610 aaKnown RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 ZBED4O75132 1171 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 TPBGLP0DKB5 382 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 FDX1P10109 184 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 ACADSP16219 412 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 ATP6V1C1P21283 382 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 TARSP26639 723 aaKnown RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 ABL2P42684 1182 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 MRPS35P82673 323 aaKnown RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 GHRHRQ02643 423 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 RNASELQ05823 741 aaKnown RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 CYP24A1Q07973 514 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 LLGL1Q15334 1064 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 P3H1Q32P28 736 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 EAPPQ56P03 285 aaPredicted RBP12.85□□□□□ -0.35
CPSF7-218ENST00000537641 CIAPIN1Q6FI81 312 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 CYP4F22Q6NT55 531 aa12.85□□□□□ -0.35
CPSF7-218ENST00000537641 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms