RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 DUOXA2Q1HG44 320 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 TSHZ1Q6ZSZ6 1077 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 ZNF606Q8WXB4 792 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 INO80BQ9C086 356 aaPredicted RBP14.24□□□□□ -0.13
VPS33B-202ENST00000535906 CENPHQ9H3R5 247 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 FZD8Q9H461 694 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 FAM169AQ9Y6X4 670 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 ACKR2O00590 384 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 PPFIA2O75334 1257 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 HOXC6P09630 235 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 COILP38432 576 aaPredicted RBP14.24□□□□□ -0.13
VPS33B-202ENST00000535906 KCNJ1P48048 391 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 DRG2P55039 364 aaKnown RBP14.24□□□□□ -0.13
VPS33B-202ENST00000535906 TFAMQ00059 246 aaKnown RBP14.24□□□□□ -0.13
VPS33B-202ENST00000535906 PTP4A2Q12974 167 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 MAMLD1Q13495 774 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 PTGISQ16647 500 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 ATF7IP2Q5U623 682 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 EEF1DP3Q658K8 133 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 MPZL3Q6UWV2 235 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 TRIM72Q6ZMU5 477 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 MMS22LQ6ZRQ5 1243 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 B4GALNT4Q76KP1 1039 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 TXLNGYQ9BZA5 131 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 MTUS1Q9ULD2 1270 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 MGAMO43451 1857 aa14.24□□□□□ -0.13
VPS33B-202ENST00000535906 ASB14A6NK59 587 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 O00370 1275 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 FSCN2O14926 492 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 CD58P19256 250 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 RPL21P46778 160 aaKnown RBP14.23□□□□□ -0.13
VPS33B-202ENST00000535906 PLTPP55058 493 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 IGBP1P78318 339 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 ARHGAP1Q07960 439 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 ZNF568Q3ZCX4 644 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 ZNF394Q53GI3 561 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 AGBL2Q5U5Z8 902 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 ZDHHC24Q6UX98 284 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 PHF13Q86YI8 300 aaPredicted RBP14.23□□□□□ -0.13
VPS33B-202ENST00000535906 TMEM192Q8IY95 271 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 CCDC105Q8IYK2 499 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 SHCBP1Q8NEM2 672 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 FBXO25Q8TCJ0 367 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 PPM1EQ8WY54 764 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 SLC10A4Q96EP9 437 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 JPH2Q9BR39 696 aaPredicted RBP14.23□□□□□ -0.13
VPS33B-202ENST00000535906 GRHL1Q9NZI5 618 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 RASAL2Q9UJF2 1139 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 ATP8A1Q9Y2Q0 1164 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 PTPN22Q9Y2R2 807 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 A0A087WUV0 522 aaPredicted RBP14.23□□□□□ -0.13
VPS33B-202ENST00000535906 GJB6O95452 261 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 C22orf31O95567 290 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 HPDP32754 393 aaPredicted RBP14.23□□□□□ -0.13
VPS33B-202ENST00000535906 SLC1A1P43005 524 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 MBTD1Q05BQ5 628 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 TFDP1Q14186 410 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 TAPT1Q6NXT6 567 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 DDX27Q96GQ7 796 aaKnown RBP14.23□□□□□ -0.13
VPS33B-202ENST00000535906 VCPIP1Q96JH7 1222 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 HERPUD2Q9BSE4 406 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 CISHQ9NSE2 258 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 TMEM51Q9NW97 253 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 ERAP1Q9NZ08 941 aa14.23□□□□□ -0.13
VPS33B-202ENST00000535906 PODXLO00592 558 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 CSDE1O75534 798 aaKnown RBP14.22□□□□□ -0.13
VPS33B-202ENST00000535906 PROSCO94903 275 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 ERLIN2O94905 339 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 WEE2P0C1S8 567 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 SGSM1Q2NKQ1 1148 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 LIN9Q5TKA1 542 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 PLEKHA7Q6IQ23 1121 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 SPATS2Q86XZ4 545 aaKnown RBP14.22□□□□□ -0.13
VPS33B-202ENST00000535906 C12orf50Q8NA57 414 aaPredicted RBP14.22□□□□□ -0.13
VPS33B-202ENST00000535906 PLVAPQ9BX97 442 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 IFT122Q9HBG6 1241 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 ATXN2Q99700 1313 aaKnown RBP14.22□□□□□ -0.13
VPS33B-202ENST00000535906 ANK1P16157 1881 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 LOC102724159A0A0B4J2E5 919 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 POTEJP0CG39 1038 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 INSRRP14616 1297 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 ADORA2AP29274 412 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 TRPC3Q13507 836 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 PWP2Q15269 919 aaKnown RBP14.22□□□□□ -0.13
VPS33B-202ENST00000535906 SURF1Q15526 300 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 TMEM132AQ24JP5 1023 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 ZNF792Q3KQV3 632 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 MAMDC4Q6UXC1 1216 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 GPRC5AQ8NFJ5 357 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 C1orf54Q8WWF1 131 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 NIF3L1Q9GZT8 377 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 XYLT2Q9H1B5 865 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 LRRC19Q9H756 370 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 LRRC4CQ9HCJ2 640 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 SLC12A6Q9UHW9 1150 aa14.22□□□□□ -0.13
VPS33B-202ENST00000535906 LGALS2P05162 132 aa14.21□□□□□ -0.13
VPS33B-202ENST00000535906 TMEM191BP0C7N4 346 aa14.21□□□□□ -0.13
VPS33B-202ENST00000535906 BRD2P25440 801 aaKnown RBP14.21□□□□□ -0.13
VPS33B-202ENST00000535906 FNTAP49354 379 aa14.21□□□□□ -0.13
VPS33B-202ENST00000535906 EIF3BP55884 814 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms