RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 FRMD3A2A2Y4 597 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 WDR27A2RRH5 827 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 ANHXE9PGG2 379 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 MEFVO15553 781 aaPredicted RBP12.86□□□□□ -0.35
KNTC1-208ENST00000535410 MICAL2O94851 1124 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 SRFP11831 508 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 PNPLA4P41247 253 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 LILRA4P59901 499 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 SMARCB1Q12824 385 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 MYBPC2Q14324 1141 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 FOXD4L5Q5VV16 416 aaPredicted RBP12.86□□□□□ -0.35
KNTC1-208ENST00000535410 C9orf57Q5W0N0 161 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 ASTLQ6HA08 431 aaPredicted RBP12.86□□□□□ -0.35
KNTC1-208ENST00000535410 OVOS1Q6IE37 1185 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 SLC39A4Q6P5W5 647 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 RSPO2Q6UXX9 243 aaPredicted RBP12.86□□□□□ -0.35
KNTC1-208ENST00000535410 THEM5Q8N1Q8 247 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 FOXD4L4Q8WXT5 416 aaPredicted RBP12.86□□□□□ -0.35
KNTC1-208ENST00000535410 FGF13Q92913 245 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 FAM213AQ9BRX8 229 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 KIAA1586Q9HCI6 787 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 TBC1D7Q9P0N9 293 aa12.86□□□□□ -0.35
KNTC1-208ENST00000535410 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
KNTC1-208ENST00000535410 STK25O00506 426 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 PIRO00625 290 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 N4BP1O75113 896 aaKnown RBP12.85□□□□□ -0.35
KNTC1-208ENST00000535410 RHOP08100 348 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 IGFBP6P24592 240 aaPredicted RBP12.85□□□□□ -0.35
KNTC1-208ENST00000535410 TAF6P49848 677 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 SNRPFP62306 86 aaKnown RBP12.85□□□□□ -0.35
KNTC1-208ENST00000535410 PFKPQ01813 784 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 ADCY1Q08828 1119 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 SURF1Q15526 300 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 ZBTB41Q5SVQ8 909 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 CNNM4Q6P4Q7 775 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 CEP57L1Q8IYX8 460 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 DHX58Q96C10 678 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 SHDQ96IW2 340 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 SENP8Q96LD8 212 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 ZNF560Q96MR9 790 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 RTP3Q9BQQ7 232 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 DPP3Q9NY33 737 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 DNMT3BQ9UBC3 853 aaKnown RBP12.85□□□□□ -0.35
KNTC1-208ENST00000535410 HSFX1Q9UBD0 423 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 PIEZO1Q92508 2521 aa12.85□□□□□ -0.35
KNTC1-208ENST00000535410 CITO14578 2027 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 MTCL1Q9Y4B5 1905 aaKnown RBP12.84□□□□□ -0.35
KNTC1-208ENST00000535410 ANO9A1A5B4 782 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 EIF3DO15371 548 aaKnown RBP eCLIP12.84□□□□□ -0.35
KNTC1-208ENST00000535410 POLR2DO15514 142 aaKnown RBP12.84□□□□□ -0.35
KNTC1-208ENST00000535410 EXTL3O43909 919 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 FGF19O95750 216 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 NFICP08651 508 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 ADSSP30520 456 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 ALDH1A3P47895 512 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 TUFMP49411 452 aaKnown RBP12.84□□□□□ -0.35
KNTC1-208ENST00000535410 EPHB3P54753 998 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 ASIC1P78348 528 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 GPR17Q13304 367 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 HTR4Q13639 388 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 SV2CQ496J9 727 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 PDZD4Q76G19 769 aaPredicted RBP12.84□□□□□ -0.35
KNTC1-208ENST00000535410 FLCNQ8NFG4 579 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 FEZF2Q8TBJ5 459 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 C7orf25Q9BPX7 421 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 TRIM9Q9C026 710 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 GPR88Q9GZN0 384 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 SLC2A4RGQ9NR83 387 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 RBAKQ9NYW8 714 aaPredicted RBP12.84□□□□□ -0.35
KNTC1-208ENST00000535410 USP25Q9UHP3 1055 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 RCOR1Q9UKL0 485 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 ASB3Q9Y575 518 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 INSL5Q9Y5Q6 135 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 NUMBLQ9Y6R0 609 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 MYO10Q9HD67 2058 aa12.84□□□□□ -0.35
KNTC1-208ENST00000535410 A0A087X0B3 334 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 PVALEFA0A1B0GWK0 134 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 ZNF233A6NK53 670 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 CYB561D2O14569 222 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 CYP11A1P05108 521 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 NTHL1P78549 312 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 TFAMQ00059 246 aaKnown RBP12.83□□□□□ -0.36
KNTC1-208ENST00000535410 NHLH1Q02575 133 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 E2F4Q16254 413 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 SHC4Q6S5L8 630 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 CRELD2Q6UXH1 353 aaPredicted RBP12.83□□□□□ -0.36
KNTC1-208ENST00000535410 BRSK2Q8IWQ3 736 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 SIX5Q8N196 739 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 GPD1LQ8N335 351 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 ITFG1Q8TB96 612 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 C2orf15Q8WU43 125 aaKnown RBP12.83□□□□□ -0.36
KNTC1-208ENST00000535410 RSAD2Q8WXG1 361 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 CORO1BQ9BR76 489 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 ASAH2Q9NR71 780 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 CGNQ9P2M7 1197 aaKnown RBP12.83□□□□□ -0.36
KNTC1-208ENST00000535410 ITGA11Q9UKX5 1188 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 PCDHA7Q9UN72 937 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 TIMM13Q9Y5L4 95 aaPredicted RBP12.83□□□□□ -0.36
KNTC1-208ENST00000535410 TRIOO75962 3097 aa12.83□□□□□ -0.36
KNTC1-208ENST00000535410 KPNA7A9QM74 516 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms