RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 SPATA1Q5VX52 437 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 TMEM173Q86WV6 379 aaPredicted RBP9.27□□□□□ -0.93
CTSF-208ENST00000530565 WDR49Q8IV35 697 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 SUGP1Q8IWZ8 645 aaKnown RBP9.27□□□□□ -0.93
CTSF-208ENST00000530565 FAM186BQ8IYM0 893 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 TMEM130Q8N3G9 435 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 BEST2Q8NFU1 509 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 FAM200AQ8TCP9 573 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 CACTINQ8WUQ7 758 aaKnown RBP9.27□□□□□ -0.93
CTSF-208ENST00000530565 BCL7CQ8WUZ0 217 aaPredicted RBP9.27□□□□□ -0.93
CTSF-208ENST00000530565 POF1BQ8WVV4 589 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 SUSD6Q92537 303 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 CCDC127Q96BQ5 260 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 EEF2KMTQ96G04 330 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 DDX27Q96GQ7 796 aaKnown RBP9.27□□□□□ -0.93
CTSF-208ENST00000530565 TMEM169Q96HH4 297 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 IGSF21Q96ID5 467 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 FNBP1Q96RU3 617 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 CGRRF1Q99675 332 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 MKNK1Q9BUB5 465 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 PHF7Q9BWX1 381 aaPredicted RBP9.27□□□□□ -0.93
CTSF-208ENST00000530565 RBSNQ9H1K0 784 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 RWDD2AQ9UIY3 292 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 ZFHX2Q9C0A1 2572 aaPredicted RBP9.27□□□□□ -0.93
CTSF-208ENST00000530565 PTPRJQ12913 1337 aa9.27□□□□□ -0.93
CTSF-208ENST00000530565 F8W810 466 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 TMEM189-UBE2V1I3L0A0 370 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 PODXLO00592 558 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 SLC16A3O15427 465 aaKnown RBP9.26□□□□□ -0.93
CTSF-208ENST00000530565 KIF4AO95239 1232 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 DLATP10515 647 aaKnown RBP9.26□□□□□ -0.93
CTSF-208ENST00000530565 EPB41P11171 864 aaKnown RBP9.26□□□□□ -0.93
CTSF-208ENST00000530565 TNNI1P19237 187 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 ERCC5P28715 1186 aaPredicted RBP9.26□□□□□ -0.93
CTSF-208ENST00000530565 AVPR2P30518 371 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 ZNF165P49910 485 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 GUCY2FP51841 1108 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 UBE3AQ05086 875 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 KCNC3Q14003 757 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 ANO6Q4KMQ2 910 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 LMBRD2Q68DH5 695 aaPredicted RBP9.26□□□□□ -0.93
CTSF-208ENST00000530565 DCLRE1AQ6PJP8 1040 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 INTS8Q75QN2 995 aaKnown RBP9.26□□□□□ -0.93
CTSF-208ENST00000530565 DDX53Q86TM3 631 aaKnown RBP9.26□□□□□ -0.93
CTSF-208ENST00000530565 RBM23Q86U06 439 aaKnown RBP9.26□□□□□ -0.93
CTSF-208ENST00000530565 CSGALNACT2Q8N6G5 542 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 C3orf58Q8NDZ4 430 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 OR5B17Q8NGF7 314 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 PLEKHO2Q8TD55 490 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 TMC2Q8TDI7 906 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 PARD3BQ8TEW8 1205 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 BORCS6Q96GS4 357 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 CEP63Q96MT8 703 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 MED15Q96RN5 788 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 INTS13Q9NVM9 706 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 DPP3Q9NY33 737 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 ADAM28Q9UKQ2 775 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 LZTS1Q9Y250 596 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 DNAH14Q0VDD8 3507 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 ZDBF2Q9HCK1 2354 aa9.26□□□□□ -0.93
CTSF-208ENST00000530565 ANO9A1A5B4 782 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 LRRIQ3A6PVS8 624 aaPredicted RBP9.25□□□□□ -0.93
CTSF-208ENST00000530565 SMTNL1A8MU46 457 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 PROB1E7EW31 1015 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 PIRO00625 290 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 TADA2AO75478 443 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 B3GAT3O94766 335 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 FGFR1OPO95684 399 aaKnown RBP9.25□□□□□ -0.93
CTSF-208ENST00000530565 EFEMP2O95967 443 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 PDGFBP01127 241 aaPredicted RBP9.25□□□□□ -0.93
CTSF-208ENST00000530565 TNNC2P02585 160 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 ITGB3P05106 788 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 TMEM191BP0C7N4 346 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 KRT13P13646 458 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 IGFBP6P24592 240 aaPredicted RBP9.25□□□□□ -0.93
CTSF-208ENST00000530565 VAMP7P51809 220 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 DLG4P78352 724 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 CLDN10P78369 228 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 ENPEPQ07075 957 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 BFSP1Q12934 665 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 PTPN21Q16825 1174 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 DUOXA2Q1HG44 320 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 C9orf57Q5W0N0 161 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 FUT10Q6P4F1 479 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 CD300LGQ6UXG3 332 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 ASCL5Q7RTU5 278 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 FILIP1Q7Z7B0 1213 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 USP37Q86T82 979 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 C1orf127Q8N9H9 656 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 HASPINQ8TF76 798 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 ZNF516Q92618 1163 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 ANP32BQ92688 251 aaKnown RBP9.25□□□□□ -0.93
CTSF-208ENST00000530565 ANKRD36BP1Q96IX9 119 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 FAM84AQ96KN4 292 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 RPGRIP1Q96KN7 1286 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 VN1R3Q9BXE9 311 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 SRRTQ9BXP5 876 aaKnown RBP9.25□□□□□ -0.93
CTSF-208ENST00000530565 MTMR12Q9C0I1 747 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 S1PR5Q9H228 398 aa9.25□□□□□ -0.93
CTSF-208ENST00000530565 STK39Q9UEW8 545 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms