RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 DHX35Q9H5Z1 703 aaKnown RBP16.21■□□□□ 0.18
PCDHA4-203ENST00000530339 NTSR2O95665 410 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 RECQLP46063 649 aaPredicted RBP16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 TWF2Q6IBS0 349 aaKnown RBP16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 SPATA33Q96N06 139 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 TMEM8AQ9HCN3 771 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 NSMCE4AQ9NXX6 385 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 MARCOQ9UEW3 520 aaPredicted RBP16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 SETD1BQ9UPS6 1966 aaKnown RBP16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 PRKCBP05771 671 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 TSTA3Q13630 321 aaPredicted RBP16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 LRRC8EQ6NSJ5 796 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 ARHGEF26Q96DR7 871 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 GJD4Q96KN9 370 aaPredicted RBP16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 CCDC90BQ9GZT6 254 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 FAM217BQ9NTX9 383 aaPredicted RBP16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 PCDHB2Q9Y5E7 798 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 O00370 1275 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 TMCC1O94876 653 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 UGP2Q16851 508 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 RNF219Q5W0B1 726 aaPredicted RBP16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 C3orf62Q6ZUJ4 267 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 FBXL16Q8N461 479 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 PBXIP1Q96AQ6 731 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 CMTM5Q96DZ9 223 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 PPP1R16BQ96T49 567 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 MANSC1Q9H8J5 431 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 MAP3K20Q9NYL2 800 aaKnown RBP16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 PPME1Q9Y570 386 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 ITSN1Q15811 1721 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 ZBTB7AO95365 584 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 RARGP13631 454 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 STAT5BP51692 787 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 RBP5P82980 135 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 NFX1Q12986 1120 aaKnown RBP16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 ZSWIM1Q9BR11 485 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 TEX13BQ9BXU2 312 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 CCDC134Q9H6E4 229 aa16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 XPO7Q9UIA9 1087 aaKnown RBP16.2■□□□□ 0.18
PCDHA4-203ENST00000530339 MAGEB2O15479 319 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 NDUFB10O96000 172 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 COG2Q14746 738 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 EPAS1Q99814 870 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 RPAP3Q9H6T3 665 aaPredicted RBP16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 KBTBD4Q9NVX7 518 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 GPR75-ASB3A0A0A6YYF3 556 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 MYCP01106 439 aaPredicted RBP16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 DDX5P17844 614 aaKnown RBP16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 TBX2Q13207 712 aaPredicted RBP16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 SNRNP35Q16560 246 aaKnown RBP16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 HABP4Q5JVS0 413 aaKnown RBP16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 AGR3Q8TD06 166 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 RAB6BQ9NRW1 208 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 SCHIP1Q9P0W5 487 aaPredicted RBP16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 ARHGAP26Q9UNA1 814 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 SPDYE2BA6NHP3 402 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 A8MXQ7 604 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 KCNN4O15554 427 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 APRTP07741 180 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 SNRPAP09012 282 aaKnown RBP16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 SPDYE6P0CI01 402 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 CTCFP49711 727 aaPredicted RBP16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 FASTKD1Q53R41 847 aaKnown RBP16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 GTF3C4Q9UKN8 822 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 PIK3C2BO00750 1634 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 NPEPPSP55786 919 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 TEKT4Q8WW24 435 aa16.19■□□□□ 0.18
PCDHA4-203ENST00000530339 MAGEA13PA6NCF6 341 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 KRT4P19013 534 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 TARSP26639 723 aaKnown RBP16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 EFHBQ8N7U6 833 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 EPS8L3Q8TE67 593 aaKnown RBP16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 SPATA31A6Q5VVP1 1343 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 SERPINB3P29508 390 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 KPNB1Q14974 876 aaKnown RBP16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 LMBRD2Q68DH5 695 aaPredicted RBP16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 NUDT18Q6ZVK8 323 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 EME1Q96AY2 570 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 ARHGAP20Q9P2F6 1191 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 CAND2O75155 1236 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 GLI1P08151 1106 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 GHRP10912 638 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 HSD17B4P51659 736 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 MKRN4PQ13434 485 aaPredicted RBP16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 CYLC2Q14093 348 aaPredicted RBP16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 PDIA6Q15084 440 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 ZBTB41Q5SVQ8 909 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 ASAP3Q8TDY4 903 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 MED15Q96RN5 788 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 SLC13A4Q9UKG4 626 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 PHTF1Q9UMS5 762 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 CHMP2BQ9UQN3 213 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 F5H423 210 aaPredicted RBP16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 GAS2O43903 313 aaKnown RBP16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 ADCY3O60266 1144 aa16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 UBTFL6P0CB48 400 aaPredicted RBP16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 SSTR3P32745 418 aaPredicted RBP16.18■□□□□ 0.18
PCDHA4-203ENST00000530339 ST3GAL1Q11201 340 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms