RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 RRADP55042 308 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 GEMIN4P57678 1058 aaKnown RBP7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 RRAGBQ5VZM2 374 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 TMEM132EQ6IEE7 984 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 MZT2AQ6P582 158 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 CNKSR3Q6P9H4 555 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 RFX8Q6ZV50 586 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 SUGP1Q8IWZ8 645 aaKnown RBP7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 ADGRG2Q8IZP9 1017 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 ANKRD53Q8N9V6 530 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 OR5M3Q8NGP4 307 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 OR56A3Q8NH54 315 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 LRRC46Q96FV0 321 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 AJUBAQ96IF1 538 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 A1CFQ9NQ94 594 aaKnown RBP7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 PDP2Q9P2J9 529 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 ZNF212Q9UDV6 495 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 PMF1-BGLAPU3KQ54 211 aa7.56□□□□□ -1.2
CAPRIN1-208ENST00000530008 TCRBV7S2A1N4TA0A589 114 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 ZNF503-AS2A6NEH8 195 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 AQP12BA6NM10 295 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 BIN1O00499 593 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 TRIM38O00635 465 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 KIAA0391O15091 583 aaKnown RBP7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 EPB41L2O43491 1005 aaKnown RBP7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 UNC5CO95185 931 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 CNOT4O95628 575 aaKnown RBP7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 NDST3O95803 873 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 GNAI2P04899 355 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 TXNP10599 105 aaKnown RBP7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 ATP5JP18859 108 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 RPL13P26373 211 aaKnown RBP7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 ADCY7P51828 1080 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 APBA1Q02410 837 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 PTH1RQ03431 593 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 PTK2BQ14289 1009 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 ACAP1Q15027 740 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 TAF5Q15542 800 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 GAGE13Q4V321 117 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 JMJD6Q6NYC1 403 aaPredicted RBP7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 MPP5Q8N3R9 675 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 DNAJC5GQ8N7S2 189 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 IPO4Q8TEX9 1081 aaKnown RBP7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 SKA1Q96BD8 255 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 DIRC2Q96SL1 478 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 NDC1Q9BTX1 674 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 MRI1Q9BV20 369 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 SGPP1Q9BX95 441 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 STK31Q9BXU1 1019 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 ENKD1Q9H0I2 346 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 EPB41L4BQ9H329 900 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 NSUN3Q9H649 340 aaKnown RBP7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 TBC1D23Q9NUY8 699 aa7.55□□□□□ -1.2
CAPRIN1-208ENST00000530008 A0A087WWL8 130 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 RRN3P2A6NIE6 340 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 TMEM233B4DJY2 109 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 EIF3FO00303 357 aaPredicted RBP7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 IRAK2O43187 625 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 DNAJB5O75953 348 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 SASH1O94885 1247 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 ZNF888P0CJ79 500 aaPredicted RBP7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 SLC6A4P31645 630 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 GZMKP49863 264 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 GP2P55259 537 aaKnown RBP7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 PSMC1P62191 440 aaKnown RBP7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 ADAM8P78325 824 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 DDX10Q13206 875 aaKnown RBP7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 USP10Q14694 798 aaKnown RBP7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 RAB30Q15771 203 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 DCAF12L1Q5VU92 463 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 ZNF365Q70YC5 407 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 FRMD5Q7Z6J6 570 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 GALNT15Q8N3T1 639 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 VGLL2Q8N8G2 317 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 GLIS1Q8NBF1 620 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 NAXEQ8NCW5 288 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 FAM71BQ8TC56 605 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 IPCEF1Q8WWN9 437 aaPredicted RBP7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 ZSCAN31Q96LW9 406 aaPredicted RBP7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 PPM1MQ96MI6 270 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 YTHDC1Q96MU7 727 aaKnown RBP7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 MAGEB5Q9BZ81 275 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 TMX4Q9H1E5 349 aaPredicted RBP7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 JADE2Q9NQC1 790 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 JKAMPQ9P055 326 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 IGSF9Q9P2J2 1179 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 RGS17Q9UGC6 210 aaPredicted RBP7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 PLEKHM1Q9Y4G2 1056 aa7.54□□□□□ -1.2
CAPRIN1-208ENST00000530008 CXorf49A8MYA2 514 aaPredicted RBP7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 SEMA7AO75326 666 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 FAM163BP0C2L3 166 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 GABRB3P28472 473 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 CSF2RBP32927 897 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 SLC11A2P49281 568 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 POU6F2P78424 691 aaPredicted RBP7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 MXRA7P84157 204 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 ZNF529Q6P280 563 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 USP30Q70CQ3 517 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 PDSS2Q86YH6 399 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 CMTM4Q8IZR5 234 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms