RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 BRIX1Q8TDN6 353 aaKnown RBP3.94□□□□□ -1.78
BRCA2-203ENST00000528762 KIAA1191Q96A73 305 aa3.94□□□□□ -1.78
BRCA2-203ENST00000528762 TMEM176AQ96HP8 235 aa3.94□□□□□ -1.78
BRCA2-203ENST00000528762 SCLT1Q96NL6 688 aa3.94□□□□□ -1.78
BRCA2-203ENST00000528762 MRPL46Q9H2W6 279 aaKnown RBP3.94□□□□□ -1.78
BRCA2-203ENST00000528762 SLITRK6Q9H5Y7 841 aa3.94□□□□□ -1.78
BRCA2-203ENST00000528762 CERS4Q9HA82 394 aa3.94□□□□□ -1.78
BRCA2-203ENST00000528762 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.94□□□□□ -1.78
BRCA2-203ENST00000528762 CPNE7Q9UBL6 633 aa3.94□□□□□ -1.78
BRCA2-203ENST00000528762 ZNF69Q9UC07 566 aa3.94□□□□□ -1.78
BRCA2-203ENST00000528762 AJAP1Q9UKB5 411 aaPredicted RBP3.94□□□□□ -1.78
BRCA2-203ENST00000528762 PNMA2Q9UL42 364 aa3.94□□□□□ -1.78
BRCA2-203ENST00000528762 TESMINQ9Y4I5 508 aa3.94□□□□□ -1.78
BRCA2-203ENST00000528762 RBM8AQ9Y5S9 174 aaKnown RBP3.94□□□□□ -1.78
BRCA2-203ENST00000528762 MORC2Q9Y6X9 1032 aaPredicted RBP3.94□□□□□ -1.78
BRCA2-203ENST00000528762 hCG_1642624A0A1W2PR95 340 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 POM121BA6NF01 834 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 F2RL2O00254 374 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 ADCY6O43306 1168 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 NCK2O43639 380 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 TBC1D4O60343 1298 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 GPR32O75388 356 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 RAD17O75943 681 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 FGF18O76093 207 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 PARP1P09874 1014 aaKnown RBP3.93□□□□□ -1.78
BRCA2-203ENST00000528762 MSX2P35548 267 aaPredicted RBP3.93□□□□□ -1.78
BRCA2-203ENST00000528762 PPM1AP35813 382 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 TECP42680 631 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 PTH1RQ03431 593 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 DUSP2Q05923 314 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 DAG1Q14118 895 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 ACAP1Q15027 740 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 ATP2B3Q16720 1220 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 ARL13BQ3SXY8 428 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 PRR16Q569H4 304 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 HIBCHQ6NVY1 386 aaPredicted RBP3.93□□□□□ -1.78
BRCA2-203ENST00000528762 CCDC174Q6PII3 467 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 SYTL1Q8IYJ3 562 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 LILRA3Q8N6C8 439 aaPredicted RBP3.93□□□□□ -1.78
BRCA2-203ENST00000528762 OR5M3Q8NGP4 307 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 CASKIN2Q8WXE0 1202 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 TNPO1Q92973 898 aaKnown RBP3.93□□□□□ -1.78
BRCA2-203ENST00000528762 ARL8AQ96BM9 186 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 ZNF503Q96F45 646 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 CDC5LQ99459 802 aaKnown RBP3.93□□□□□ -1.78
BRCA2-203ENST00000528762 SLC6A15Q9H2J7 730 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 PNPLA8Q9NP80 782 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 SIDT1Q9NXL6 827 aaKnown RBP3.93□□□□□ -1.78
BRCA2-203ENST00000528762 MOCS1Q9NZB8 636 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 PGAP2Q9UHJ9 254 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 CEP83Q9Y592 693 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 CTDP1Q9Y5B0 961 aaPredicted RBP3.93□□□□□ -1.78
BRCA2-203ENST00000528762 ACTL7AQ9Y615 435 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 DGKBQ9Y6T7 804 aa3.93□□□□□ -1.78
BRCA2-203ENST00000528762 NT5C1B-RDH14C9J2C7 533 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 APOL1O14791 398 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 TEX33O43247 280 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 WDHD1O75717 1129 aaPredicted RBP3.92□□□□□ -1.78
BRCA2-203ENST00000528762 TOX4O94842 621 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 JUNP05412 331 aaKnown RBP3.92□□□□□ -1.78
BRCA2-203ENST00000528762 VSIG10L2P0DP72 767 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 NPR1P16066 1061 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 HDCP19113 662 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 CD53P19397 219 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 PCSK1P29120 753 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 GUCY1A2P33402 732 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 KCNJ5P48544 419 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 ADCY7P51828 1080 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 MAPK10P53779 464 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 ATP2C1P98194 919 aaPredicted RBP3.92□□□□□ -1.78
BRCA2-203ENST00000528762 APBA1Q02410 837 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 CREMQ03060 361 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 TNFAIP2Q03169 654 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 FOXL1Q12952 345 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 DUSP8Q13202 625 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 SP140Q13342 867 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 MTM1Q13496 603 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 LSM12Q3MHD2 195 aaKnown RBP3.92□□□□□ -1.78
BRCA2-203ENST00000528762 FAM47AQ5JRC9 791 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 MIIPQ5JXC2 388 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 KRT40Q6A162 431 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 PGBD2Q6P3X8 592 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 TLDC1Q6P9B6 456 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 LDHAL6AQ6ZMR3 332 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 USP30Q70CQ3 517 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 SESTD1Q86VW0 696 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 PPP1R3BQ86XI6 285 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 FAM90A1Q86YD7 464 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 C1orf210Q8IVY1 113 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 TRMT2AQ8IZ69 625 aaKnown RBP3.92□□□□□ -1.78
BRCA2-203ENST00000528762 CCDC33Q8N5R6 958 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 ATP11CQ8NB49 1132 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 SPATA5Q8NB90 893 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 IL17RDQ8NFM7 739 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 IL17DQ8TAD2 202 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 MDM1Q8TC05 714 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 CFHR4Q92496 578 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 CCT6BQ92526 530 aa3.92□□□□□ -1.78
BRCA2-203ENST00000528762 SLC7A6OSQ96CW6 309 aaPredicted RBP3.92□□□□□ -1.78
BRCA2-203ENST00000528762 MSLNLQ96KJ4 702 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms