RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 MYEOVQ96EZ4 313 aa5.54□□□□□ -1.52
CD44-215ENST00000525241 C8orf48Q96LL4 319 aa5.54□□□□□ -1.52
CD44-215ENST00000525241 NT5C1BQ96P26 610 aa5.54□□□□□ -1.52
CD44-215ENST00000525241 PNKPQ96T60 521 aa5.54□□□□□ -1.52
CD44-215ENST00000525241 B3GNT5Q9BYG0 378 aa5.54□□□□□ -1.52
CD44-215ENST00000525241 GPR35Q9HC97 309 aa5.54□□□□□ -1.52
CD44-215ENST00000525241 SLAMF7Q9NQ25 335 aa5.54□□□□□ -1.52
CD44-215ENST00000525241 CFAP97Q9P2B7 532 aa5.54□□□□□ -1.52
CD44-215ENST00000525241 PCDHA6Q9UN73 950 aa5.54□□□□□ -1.52
CD44-215ENST00000525241 FZD1Q9UP38 647 aa5.54□□□□□ -1.52
CD44-215ENST00000525241 MAP3K2Q9Y2U5 619 aa5.54□□□□□ -1.52
CD44-215ENST00000525241 TMEM200CA6NKL6 621 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 E9PLN8 166 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 NDUFA10O95299 355 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 GNAI3P08754 354 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 USP14P54578 494 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 PSMC1P62191 440 aaKnown RBP5.53□□□□□ -1.52
CD44-215ENST00000525241 GNAI1P63096 354 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 HSD11B2P80365 405 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 GALEQ14376 348 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 LLGL1Q15334 1064 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 EMC10Q5UCC4 262 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 SWSAP1Q6NVH7 229 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 AOPEPQ8N6M6 819 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 Q8NA96 180 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 PDPRQ8NCN5 879 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 SLC17A8Q8NDX2 589 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 BRIX1Q8TDN6 353 aaKnown RBP5.53□□□□□ -1.52
CD44-215ENST00000525241 SCAMP4Q969E2 229 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 MTFMTQ96DP5 389 aaKnown RBP5.53□□□□□ -1.52
CD44-215ENST00000525241 ADAM2Q99965 735 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 VKORC1Q9BQB6 163 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 ZNF341Q9BYN7 854 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 IMPG2Q9BZV3 1241 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 NRDE2Q9H7Z3 1164 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 STAP2Q9UGK3 403 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 L1RE1Q9UN81 338 aa5.53□□□□□ -1.52
CD44-215ENST00000525241 ZNF785A8K8V0 405 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 NPIPB8E9PQR5 432 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 FAM227AF5H4B4 570 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 NARSO43776 548 aaKnown RBP5.52□□□□□ -1.53
CD44-215ENST00000525241 GPANK1O95872 356 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 RARBP10826 455 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 LAG3P18627 525 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 HDCP19113 662 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 BMPR1AP36894 532 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 GPSM2P81274 684 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 EXOSC9Q06265 439 aaKnown RBP5.52□□□□□ -1.53
CD44-215ENST00000525241 KHDC1LQ5JSQ8 128 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 DBX2Q6ZNG2 339 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 MRGPREQ86SM8 312 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 CFAP52Q8N1V2 620 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 Q8N1X5 172 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 CPEB3Q8NE35 698 aaKnown RBP5.52□□□□□ -1.53
CD44-215ENST00000525241 HAS1Q92839 578 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 MRGPRX1Q96LB2 322 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 ZMAT3Q9HA38 289 aaKnown RBP5.52□□□□□ -1.53
CD44-215ENST00000525241 RSAD1Q9HA92 442 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 ATP6V0A4Q9HBG4 840 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 SARS2Q9NP81 518 aaKnown RBP5.52□□□□□ -1.53
CD44-215ENST00000525241 PRDM11Q9NQV5 511 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.52□□□□□ -1.53
CD44-215ENST00000525241 CPA4Q9UI42 421 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 AGAP1Q9UPQ3 857 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 CDYLQ9Y232 598 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 HS3ST4Q9Y661 456 aa5.52□□□□□ -1.53
CD44-215ENST00000525241 FRMPD2Q68DX3 1309 aaPredicted RBP5.51□□□□□ -1.53
CD44-215ENST00000525241 CENPVL1A0A0U1RR11 272 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 LPXNO60711 386 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 ZFPL1O95159 310 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 HRGP04196 525 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 HLA-DOAP06340 250 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 PTGS2P35354 604 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 ZNF135P52742 658 aaPredicted RBP5.51□□□□□ -1.53
CD44-215ENST00000525241 SOX8P57073 446 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 CXADRP78310 365 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 RESTQ13127 1097 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 HABP2Q14520 560 aaPredicted RBP5.51□□□□□ -1.53
CD44-215ENST00000525241 CRB2Q5IJ48 1285 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.51□□□□□ -1.53
CD44-215ENST00000525241 MAEAQ7L5Y9 396 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 SRGAP1Q7Z6B7 1085 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 DGKHQ86XP1 1220 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 ZNF483Q8TF39 744 aaPredicted RBP5.51□□□□□ -1.53
CD44-215ENST00000525241 NACC2Q96BF6 587 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 BOD1Q96IK1 185 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 LRIG1Q96JA1 1093 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 MED15Q96RN5 788 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 MMRN2Q9H8L6 949 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 FAM204AQ9H8W3 233 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 TMEM74BQ9NUR3 256 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 KCNE5Q9UJ90 142 aa5.51□□□□□ -1.53
CD44-215ENST00000525241 REXO2Q9Y3B8 237 aaKnown RBP5.51□□□□□ -1.53
CD44-215ENST00000525241 CAPN8A6NHC0 703 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 TPP1O14773 563 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 KIF3BO15066 747 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 ZBED1O96006 694 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 TACR2P21452 398 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 DDX6P26196 483 aaKnown RBP eCLIP5.5□□□□□ -1.53
CD44-215ENST00000525241 POU6F2P78424 691 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms