RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 PPP1R35Q8TAP8 253 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 SLC25A43Q8WUT9 341 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-206ENST00000523469 SLC35A4Q96G79 324 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 RNPEPQ9H4A4 650 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 RLIMQ9NVW2 624 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 CFAP97Q9P2B7 532 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 FPGT-TNNI3KV9GXZ4 949 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 CUL7Q14999 1698 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 GLI2P10070 1586 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 A0A088AWK7 358 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 TUSC2O75896 110 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 AGFG2O95081 481 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 TUBA3CQ13748 450 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 PLS1Q14651 629 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 TUBA3EQ6PEY2 450 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 DAAM2Q86T65 1068 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 PDSS2Q86YH6 399 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 SH2D3CQ8N5H7 860 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 LRFN3Q9BTN0 628 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 TEX101Q9BY14 249 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 VPS11Q9H270 941 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 MRPL46Q9H2W6 279 aaKnown RBP7.49□□□□□ -1.21
CPNE3-206ENST00000523469 ZNF768Q9H5H4 540 aaKnown RBP7.49□□□□□ -1.21
CPNE3-206ENST00000523469 BRD9Q9H8M2 597 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 ZDHHC8Q9ULC8 765 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 MAP3K4Q9Y6R4 1608 aa7.49□□□□□ -1.21
CPNE3-206ENST00000523469 RUSC2Q8N2Y8 1516 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 ABCA10Q8WWZ4 1543 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 A0A1B0GTW7 788 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 VSTM5A8MXK1 200 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 MATN3O15232 486 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 PPFIA4O75335 1185 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 NOMO3P69849 1222 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 FAM189BP81408 668 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 DGCR2P98153 550 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 LSM12Q3MHD2 195 aaKnown RBP7.48□□□□□ -1.21
CPNE3-206ENST00000523469 NOMO2Q5JPE7 1267 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 OVCH2Q7RTZ1 564 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 MARS2Q96GW9 593 aaKnown RBP7.48□□□□□ -1.21
CPNE3-206ENST00000523469 PNKPQ96T60 521 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 ZNF747Q9BV97 191 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 C1orf43Q9BWL3 253 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 TMEM60Q9H2L4 133 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 AKIP1Q9NQ31 210 aa7.48□□□□□ -1.21
CPNE3-206ENST00000523469 FHAD1B1AJZ9 1412 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 NCR1O76036 304 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 HLA-DOAP06340 250 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 GJB1P08034 283 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 MYBP10242 640 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 PTGS2P35354 604 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 AGFG1P52594 562 aaKnown RBP7.47□□□□□ -1.21
CPNE3-206ENST00000523469 RAB1AP62820 205 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 SLFN5Q08AF3 891 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 FGL2Q14314 439 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 GBX1Q14549 363 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 PUM1Q14671 1186 aaKnown RBP eCLIP7.47□□□□□ -1.21
CPNE3-206ENST00000523469 ANO6Q4KMQ2 910 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 DBX2Q6ZNG2 339 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 PPP1R3BQ86XI6 285 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 MAPKAPK5Q8IW41 473 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 PLBD2Q8NHP8 589 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 BRIX1Q8TDN6 353 aaKnown RBP7.47□□□□□ -1.21
CPNE3-206ENST00000523469 C8orf48Q96LL4 319 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 FAM204AQ9H8W3 233 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 PRDM11Q9NQV5 511 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 SLC45A2Q9UMX9 530 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 PCDHA1Q9Y5I3 950 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 PTPRMP28827 1452 aa7.47□□□□□ -1.21
CPNE3-206ENST00000523469 FAM227AF5H4B4 570 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 MATN4O95460 622 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 CFIP05156 583 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 FCER1AP12319 257 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 LAG3P18627 525 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 TNFRSF1AP19438 455 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 NR4A1P22736 598 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 MXRA7P84157 204 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 KIF22Q14807 665 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 FOXR2Q6PJQ5 311 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 LRRC55Q6ZSA7 311 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 HAS1Q92839 578 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 TNPO1Q92973 898 aaKnown RBP7.46□□□□□ -1.22
CPNE3-206ENST00000523469 SCAMP4Q969E2 229 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 LENG9Q96B70 501 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 MYEOVQ96EZ4 313 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 KLHL32Q96NJ5 620 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 MED15Q96RN5 788 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 ZSWIM1Q9BR11 485 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 ZNF341Q9BYN7 854 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 KRTAP4-7Q9BYR0 210 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 ARMT1Q9H993 441 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 SARS2Q9NP81 518 aaKnown RBP7.46□□□□□ -1.22
CPNE3-206ENST00000523469 SLAMF7Q9NQ25 335 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 OBP2AQ9NY56 170 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 FZD1Q9UP38 647 aa7.46□□□□□ -1.22
CPNE3-206ENST00000523469 PLB1Q6P1J6 1458 aa7.45□□□□□ -1.22
CPNE3-206ENST00000523469 PRSS29PA6NIE9 313 aa7.45□□□□□ -1.22
CPNE3-206ENST00000523469 MARCH11A6NNE9 402 aa7.45□□□□□ -1.22
CPNE3-206ENST00000523469 MARCH6O60337 910 aa7.45□□□□□ -1.22
CPNE3-206ENST00000523469 GPANK1O95872 356 aa7.45□□□□□ -1.22
CPNE3-206ENST00000523469 RARBP10826 455 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms