RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 GRM1Q13255 1194 aa8.84□□□□□ -0.99
LSM1-202ENST00000520286 RNF151Q2KHN1 245 aa8.84□□□□□ -0.99
LSM1-202ENST00000520286 ALFQ53S48 1182 aa8.84□□□□□ -0.99
LSM1-202ENST00000520286 LMBRD2Q68DH5 695 aaPredicted RBP8.84□□□□□ -0.99
LSM1-202ENST00000520286 BEND5Q7L4P6 421 aa8.84□□□□□ -0.99
LSM1-202ENST00000520286 NBPF11Q86T75 865 aa8.84□□□□□ -0.99
LSM1-202ENST00000520286 NLGN4YQ8NFZ3 816 aaPredicted RBP8.84□□□□□ -0.99
LSM1-202ENST00000520286 MBD6Q96DN6 1003 aa8.84□□□□□ -0.99
LSM1-202ENST00000520286 LCORQ96JN0 433 aaPredicted RBP8.84□□□□□ -0.99
LSM1-202ENST00000520286 STK33Q9BYT3 514 aa8.84□□□□□ -0.99
LSM1-202ENST00000520286 CNOT6Q9ULM6 557 aaKnown RBP8.84□□□□□ -0.99
LSM1-202ENST00000520286 MRC2Q9UBG0 1479 aa8.83□□□□□ -1
LSM1-202ENST00000520286 A0A1B0GTL3 188 aa8.83□□□□□ -1
LSM1-202ENST00000520286 PJA2O43164 708 aa8.83□□□□□ -1
LSM1-202ENST00000520286 SNRPA1P09661 255 aaKnown RBP8.83□□□□□ -1
LSM1-202ENST00000520286 PDIA3P30101 505 aaKnown RBP8.83□□□□□ -1
LSM1-202ENST00000520286 SLC6A4P31645 630 aa8.83□□□□□ -1
LSM1-202ENST00000520286 PSMC1P62191 440 aaKnown RBP8.83□□□□□ -1
LSM1-202ENST00000520286 ZNF365Q70YC5 407 aa8.83□□□□□ -1
LSM1-202ENST00000520286 AOPEPQ8N6M6 819 aa8.83□□□□□ -1
LSM1-202ENST00000520286 FANCBQ8NB91 859 aa8.83□□□□□ -1
LSM1-202ENST00000520286 ISCA1Q9BUE6 129 aa8.83□□□□□ -1
LSM1-202ENST00000520286 EPC1Q9H2F5 836 aa8.83□□□□□ -1
LSM1-202ENST00000520286 PNMA2Q9UL42 364 aa8.83□□□□□ -1
LSM1-202ENST00000520286 KCTD3Q9Y597 815 aa8.83□□□□□ -1
LSM1-202ENST00000520286 UBE2QL1A1L167 161 aa8.82□□□□□ -1
LSM1-202ENST00000520286 PYCARD-AS1I3L0S3 204 aa8.82□□□□□ -1
LSM1-202ENST00000520286 FFAR3O14843 346 aa8.82□□□□□ -1
LSM1-202ENST00000520286 SLC26A4O43511 780 aa8.82□□□□□ -1
LSM1-202ENST00000520286 HAUS5O94927 633 aa8.82□□□□□ -1
LSM1-202ENST00000520286 UNC5CO95185 931 aa8.82□□□□□ -1
LSM1-202ENST00000520286 AMHP03971 560 aa8.82□□□□□ -1
LSM1-202ENST00000520286 CD53P19397 219 aa8.82□□□□□ -1
LSM1-202ENST00000520286 RAP2BP61225 183 aa8.82□□□□□ -1
LSM1-202ENST00000520286 UNC13DQ70J99 1090 aa8.82□□□□□ -1
LSM1-202ENST00000520286 RNF44Q7L0R7 432 aa8.82□□□□□ -1
LSM1-202ENST00000520286 PDSS2Q86YH6 399 aa8.82□□□□□ -1
LSM1-202ENST00000520286 MPP5Q8N3R9 675 aa8.82□□□□□ -1
LSM1-202ENST00000520286 CFHR4Q92496 578 aa8.82□□□□□ -1
LSM1-202ENST00000520286 LTV1Q96GA3 475 aaPredicted RBP8.82□□□□□ -1
LSM1-202ENST00000520286 ANAPC4Q9UJX5 808 aa8.82□□□□□ -1
LSM1-202ENST00000520286 ITGB1BP2Q9UKP3 347 aa8.82□□□□□ -1
LSM1-202ENST00000520286 SLC39A10Q9ULF5 831 aa8.82□□□□□ -1
LSM1-202ENST00000520286 SLC45A2Q9UMX9 530 aa8.82□□□□□ -1
LSM1-202ENST00000520286 MAN2B2Q9Y2E5 1009 aa8.82□□□□□ -1
LSM1-202ENST00000520286 PNPLA7Q6ZV29 1317 aa8.81□□□□□ -1
LSM1-202ENST00000520286 GOLGA6L3A6NEY3 463 aa8.81□□□□□ -1
LSM1-202ENST00000520286 ZNF785A8K8V0 405 aa8.81□□□□□ -1
LSM1-202ENST00000520286 HOXA3O43365 443 aaPredicted RBP8.81□□□□□ -1
LSM1-202ENST00000520286 MED14OSP0DP75 135 aa8.81□□□□□ -1
LSM1-202ENST00000520286 ALAS1P13196 640 aa8.81□□□□□ -1
LSM1-202ENST00000520286 CARSP49589 748 aaKnown RBP8.81□□□□□ -1
LSM1-202ENST00000520286 CLRN1P58418 232 aa8.81□□□□□ -1
LSM1-202ENST00000520286 CATSPERGQ6ZRH7 1159 aa8.81□□□□□ -1
LSM1-202ENST00000520286 KBTBD2Q8IY47 623 aa8.81□□□□□ -1
LSM1-202ENST00000520286 DNAJC5GQ8N7S2 189 aa8.81□□□□□ -1
LSM1-202ENST00000520286 MUL1Q969V5 352 aa8.81□□□□□ -1
LSM1-202ENST00000520286 C18orf8Q96DM3 657 aa8.81□□□□□ -1
LSM1-202ENST00000520286 GPR35Q9HC97 309 aa8.81□□□□□ -1
LSM1-202ENST00000520286 A1CFQ9NQ94 594 aaKnown RBP8.81□□□□□ -1
LSM1-202ENST00000520286 LZTS1Q9Y250 596 aa8.81□□□□□ -1
LSM1-202ENST00000520286 PLEKHM1Q9Y4G2 1056 aa8.81□□□□□ -1
LSM1-202ENST00000520286 SMARCA4P51532 1647 aa8.8□□□□□ -1
LSM1-202ENST00000520286 PMS2P1A4D2B8 440 aa8.8□□□□□ -1
LSM1-202ENST00000520286 MBD3L4A6NDZ8 208 aaPredicted RBP8.8□□□□□ -1
LSM1-202ENST00000520286 MBD3L3A6NE82 208 aaPredicted RBP8.8□□□□□ -1
LSM1-202ENST00000520286 TMEM233B4DJY2 109 aa8.8□□□□□ -1
LSM1-202ENST00000520286 B5MCH6 92 aa8.8□□□□□ -1
LSM1-202ENST00000520286 RFXAPO00287 272 aa8.8□□□□□ -1
LSM1-202ENST00000520286 HNRNPDLO14979 420 aaKnown RBP8.8□□□□□ -1
LSM1-202ENST00000520286 DNAJB5O75953 348 aa8.8□□□□□ -1
LSM1-202ENST00000520286 STC2O76061 302 aa8.8□□□□□ -1
LSM1-202ENST00000520286 POMCP01189 267 aa8.8□□□□□ -1
LSM1-202ENST00000520286 ANXA1P04083 346 aa8.8□□□□□ -1
LSM1-202ENST00000520286 GRPP07492 148 aa8.8□□□□□ -1
LSM1-202ENST00000520286 KLRC1P26715 233 aa8.8□□□□□ -1
LSM1-202ENST00000520286 SLC11A2P49281 568 aa8.8□□□□□ -1
LSM1-202ENST00000520286 POU6F2P78424 691 aaPredicted RBP8.8□□□□□ -1
LSM1-202ENST00000520286 MXRA7P84157 204 aa8.8□□□□□ -1
LSM1-202ENST00000520286 DUSP8Q13202 625 aa8.8□□□□□ -1
LSM1-202ENST00000520286 RIN1Q13671 783 aa8.8□□□□□ -1
LSM1-202ENST00000520286 ZACNQ401N2 412 aa8.8□□□□□ -1
LSM1-202ENST00000520286 ZFYVE27Q5T4F4 411 aa8.8□□□□□ -1
LSM1-202ENST00000520286 ANKS6Q68DC2 871 aa8.8□□□□□ -1
LSM1-202ENST00000520286 SLC15A4Q8N697 577 aa8.8□□□□□ -1
LSM1-202ENST00000520286 OR56A3Q8NH54 315 aa8.8□□□□□ -1
LSM1-202ENST00000520286 DDX17Q92841 729 aaKnown RBP8.8□□□□□ -1
LSM1-202ENST00000520286 PPP1R16BQ96T49 567 aa8.8□□□□□ -1
LSM1-202ENST00000520286 TCF25Q9BQ70 676 aa8.8□□□□□ -1
LSM1-202ENST00000520286 HEPHQ9BQS7 1158 aa8.8□□□□□ -1
LSM1-202ENST00000520286 STK31Q9BXU1 1019 aa8.8□□□□□ -1
LSM1-202ENST00000520286 EIF2AQ9BY44 585 aaKnown RBP8.8□□□□□ -1
LSM1-202ENST00000520286 CHST8Q9H2A9 424 aa8.8□□□□□ -1
LSM1-202ENST00000520286 GSTO2Q9H4Y5 243 aa8.8□□□□□ -1
LSM1-202ENST00000520286 GPR52Q9Y2T5 361 aa8.8□□□□□ -1
LSM1-202ENST00000520286 SLC4A7Q9Y6M7 1214 aa8.8□□□□□ -1
LSM1-202ENST00000520286 WDR62O43379 1518 aa8.8□□□□□ -1
LSM1-202ENST00000520286 A0A087WWL8 130 aa8.79□□□□□ -1
LSM1-202ENST00000520286 A0A1W2PRX2 142 aa8.79□□□□□ -1
LSM1-202ENST00000520286 CLCA1A8K7I4 914 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms