RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ARMC6Q6NXE6 501 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 GDF7Q7Z4P5 450 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 KIAA0319LQ8IZA0 1049 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 FAM43AQ8N2R8 423 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 PPP1R35Q8TAP8 253 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 TBC1D15Q8TC07 691 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 CPT1CQ8TCG5 803 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 BRIX1Q8TDN6 353 aaKnown RBP4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 TTC17Q96AE7 1141 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 PHACTR3Q96KR7 559 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 LRFN3Q9BTN0 628 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 SIK2Q9H0K1 926 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 MRPL46Q9H2W6 279 aaKnown RBP4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 RNPEPQ9H4A4 650 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 SARS2Q9NP81 518 aaKnown RBP4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 CNNM1Q9NRU3 951 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 CEP72Q9P209 647 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 CHST2Q9Y4C5 530 aa4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 FRMPD2Q68DX3 1309 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P41-201ENST00000520234 CDHR4A6H8M9 788 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 AHRRA9YTQ3 701 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 AGFG2O95081 481 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 CHEK2O96017 543 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 HLA-DOAP06340 250 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 GJB1P08034 283 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 RARBP10826 455 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 SLC6A2P23975 617 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 SLC6A4P31645 630 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZEB1P37275 1124 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 CACNB3P54284 484 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 INHBCP55103 352 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 RAB1AP62820 205 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 MXRA7P84157 204 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 KIF22Q14807 665 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 GRM3Q14832 879 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 UTP14CQ5TAP6 766 aaKnown RBP4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 TSHZ3Q63HK5 1081 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 NPNTQ6UXI9 565 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 SH2D3CQ8N5H7 860 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 OR56A1Q8NGH5 318 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 PLBD2Q8NHP8 589 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 DDX17Q92841 729 aaKnown RBP4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 SCAMP4Q969E2 229 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZG16BQ96DA0 208 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 MED15Q96RN5 788 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 PNKPQ96T60 521 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 B3GNT5Q9BYG0 378 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 GPR35Q9HC97 309 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 KLHL11Q9NVR0 708 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 TRPM5Q9NZQ8 1165 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 L1RE1Q9UN81 338 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 USP15Q9Y4E8 981 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 FPGT-TNNI3KV9GXZ4 949 aa4.15□□□□□ -1.75
HMGB1P41-201ENST00000520234 A0A087X1B8 175 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 A0A1B0GTW7 788 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 RPS6KA4O75676 772 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZBED1O96006 694 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 GNAI2P04899 355 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 FAM193AP78312 1265 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 FOXE3Q13461 319 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 PDCD4Q53EL6 469 aaKnown RBP4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 KHDC1LQ5JSQ8 128 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 MIIPQ5JXC2 388 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 FOXR2Q6PJQ5 311 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 MAEAQ7L5Y9 396 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 PPP1R3BQ86XI6 285 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 CACTINQ8WUQ7 758 aaKnown RBP4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 SLC25A43Q8WUT9 341 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 TNPO1Q92973 898 aaKnown RBP4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 PLEKHG4BQ96PX9 1271 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 NEU1Q99519 415 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 C1orf43Q9BWL3 253 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 ARMT1Q9H993 441 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 RSAD1Q9HA92 442 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 PIH1D1Q9NWS0 290 aaKnown RBP4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 DDX20Q9UHI6 824 aaKnown RBP4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 NEU2Q9Y3R4 380 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 PCDHA1Q9Y5I3 950 aa4.14□□□□□ -1.75
HMGB1P41-201ENST00000520234 A0A1W2PPL8 197 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 PRSS29PA6NIE9 313 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZNF185O15231 689 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 PHGDHO43175 533 aaKnown RBP4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 FRS3O43559 492 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 PRC1O43663 620 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 FAM20BO75063 409 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 CAND2O75155 1236 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 PRSS23O95084 383 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 MATN4O95460 622 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 CFIP05156 583 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 MYBP10242 640 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 BMPR1AP36894 532 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 GNALP38405 381 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 USP14P54578 494 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 NOMO3P69849 1222 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 SLC25A3Q00325 362 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 PIGFQ07326 219 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 SLFN5Q08AF3 891 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 SPDYE7PQ495Y7 208 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 NOMO2Q5JPE7 1267 aa4.13□□□□□ -1.75
HMGB1P41-201ENST00000520234 CYB5RLQ6IPT4 315 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms